Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 RNA5SP156-201ENST00000410250 110 ntBASIC5.7□□□□□ -1.5
VPS33AQ96AX1 RN7SKP144-201ENST00000411108 279 ntBASIC5.7□□□□□ -1.5
VPS33AQ96AX1 AL356806.1-201ENST00000422524 916 ntBASIC5.7□□□□□ -1.5
VPS33AQ96AX1 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.7□□□□□ -1.5
VPS33AQ96AX1 AL606490.8-201ENST00000441624 319 ntBASIC5.7□□□□□ -1.5
VPS33AQ96AX1 AL031681.1-201ENST00000443304 400 ntBASIC5.7□□□□□ -1.5
VPS33AQ96AX1 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 ZNF619P1-201ENST00000446539 752 ntBASIC5.7□□□□□ -1.5
VPS33AQ96AX1 RSU1P1-201ENST00000453416 441 ntBASIC5.7□□□□□ -1.5
VPS33AQ96AX1 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 AC079080.1-201ENST00000479841 822 ntBASIC5.7□□□□□ -1.5
VPS33AQ96AX1 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 AC078899.1-201ENST00000521432 1185 ntBASIC5.7□□□□□ -1.5
VPS33AQ96AX1 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 TDGP1-201ENST00000543961 1229 ntBASIC5.7□□□□□ -1.5
VPS33AQ96AX1 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 AC007346.2-201ENST00000564816 892 ntBASIC5.7□□□□□ -1.5
VPS33AQ96AX1 AC019322.1-201ENST00000571869 389 ntBASIC5.7□□□□□ -1.5
VPS33AQ96AX1 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 AC006115.2-201ENST00000596823 202 ntBASIC5.7□□□□□ -1.5
VPS33AQ96AX1 AP001823.1-201ENST00000604056 1003 ntBASIC5.7□□□□□ -1.5
VPS33AQ96AX1 AL591222.2-201ENST00000604443 754 ntBASIC5.7□□□□□ -1.5
VPS33AQ96AX1 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.7□□□□□ -1.5
VPS33AQ96AX1 AC211486.4-201ENST00000621495 113 ntBASIC5.7□□□□□ -1.5
VPS33AQ96AX1 AC099654.15-201ENST00000639802 509 ntBASIC5.7□□□□□ -1.5
VPS33AQ96AX1 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 RPL10P10-201ENST00000403509 664 ntBASIC5.69□□□□□ -1.5
VPS33AQ96AX1 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AC093084.1-201ENST00000424233 687 ntBASIC5.69□□□□□ -1.5
VPS33AQ96AX1 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 WDR82P2-201ENST00000444540 928 ntBASIC5.69□□□□□ -1.5
VPS33AQ96AX1 RPS18P1-201ENST00000447840 458 ntBASIC5.69□□□□□ -1.5
VPS33AQ96AX1 SEPT7P3-201ENST00000455017 621 ntBASIC5.69□□□□□ -1.5
VPS33AQ96AX1 RPL12P39-201ENST00000455456 496 ntBASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AL603882.1-201ENST00000463059 681 ntBASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AC095052.1-201ENST00000509955 863 ntBASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 OR8Q1P-201ENST00000526467 655 ntBASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AC090424.1-201ENST00000535243 736 ntBASIC5.69□□□□□ -1.5
VPS33AQ96AX1 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AC005726.4-201ENST00000582858 458 ntBASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 MIR212-201ENST00000586026 110 ntBASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 U91328.4-201ENST00000608919 517 ntBASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 MIR6885-201ENST00000612241 66 ntBASIC5.69□□□□□ -1.5
VPS33AQ96AX1 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AL122023.1-201ENST00000622847 530 ntBASIC5.69□□□□□ -1.5
VPS33AQ96AX1 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS33AQ96AX1 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms