Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 OR52B5P-204ENST00000641744 3467 ntBASIC6.12□□□□□ -1.43
HMGB4Q8WW32 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
HMGB4Q8WW32 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 GNL2P1-201ENST00000451274 2190 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AC013488.1-201ENST00000526618 1838 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 FO082842.1-201ENST00000423552 1370 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 SNORD115-48-201ENST00000364764 76 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 PTGES3P2-201ENST00000407942 482 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 SDHDP6-201ENST00000414693 480 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 SEC63P1-201ENST00000425785 1258 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AC016027.4-201ENST00000450866 277 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 RN7SL629P-201ENST00000489622 285 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AC067904.2-201ENST00000517322 1283 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 TMEM97P2-201ENST00000517841 403 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AP000648.1-201ENST00000529682 397 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AL121839.1-201ENST00000556233 1185 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AC051619.2-201ENST00000559063 397 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AC007225.2-201ENST00000562529 256 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 DNAJC19P3-201ENST00000594491 331 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 BNIP3P39-201ENST00000601077 554 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AC005776.1-201ENST00000603164 290 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 KATNBL1P5-201ENST00000605015 517 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AL031601.1-201ENST00000605702 394 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 CR589904.2-201ENST00000612533 440 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 RNA5SP440-201ENST00000612665 119 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AL021918.2-201ENST00000613415 194 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AL137067.2-201ENST00000621202 131 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AL357562.1-201ENST00000624911 609 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AL590396.2-201ENST00000636511 1041 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AC012254.3-201ENST00000591183 2117 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AP001541.1-201ENST00000623322 1904 ntBASIC6.11□□□□□ -1.43
HMGB4Q8WW32 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.11□□□□□ -1.43
HMGB4Q8WW32 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 CDY5P-201ENST00000411487 1580 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 CDY9P-201ENST00000451397 1580 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 SHQ1P1-201ENST00000437111 1544 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 BIN2P1-201ENST00000504996 1530 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 CBX1P3-201ENST00000413296 527 ntBASIC6.1□□□□□ -1.43
HMGB4Q8WW32 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.1□□□□□ -1.43
HMGB4Q8WW32 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms