Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 DUXAP2-201ENST00000519198 589 ntBASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 NDUFA5P2-201ENST00000519723 344 ntBASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 AC024405.1-201ENST00000532521 1042 ntBASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 OR9G2P-201ENST00000533326 880 ntBASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 OR5BK1P-201ENST00000550421 823 ntBASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 AP005262.1-201ENST00000582646 997 ntBASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 MIR212-201ENST00000586026 110 ntBASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 AC005034.4-201ENST00000603612 899 ntBASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 OR7M1P-201ENST00000608946 533 ntBASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 AC007684.1-201ENST00000609671 477 ntBASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 AC026368.1-201ENST00000614934 690 ntBASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 AC004009.2-201ENST00000623016 728 ntBASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHKBP1Q8TBC3 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 THAP12P8-201ENST00000447914 2115 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AL121949.2-201ENST00000403446 1548 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AL512329.1-201ENST00000404600 1592 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC007406.5-201ENST00000570140 3170 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 MTHFD2P5-201ENST00000320415 844 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 RNU4-76P-201ENST00000364509 141 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC019178.1-201ENST00000392337 440 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 OR6C69P-201ENST00000394268 893 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 UBTFL2-201ENST00000411859 1191 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 MTND4P3-201ENST00000417829 541 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 CDY14P-201ENST00000431260 1014 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 GAPDHP19-201ENST00000431768 1005 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 BX119917.1-201ENST00000432517 502 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 USP9YP35-201ENST00000435696 412 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 NDUFS5P5-201ENST00000437256 321 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC241584.1-201ENST00000438469 1241 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 RPS18P1-201ENST00000447840 458 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 CDY23P-201ENST00000451661 1014 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AL358876.1-201ENST00000453364 1075 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 ZNF114P1-201ENST00000453500 292 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC008280.2-201ENST00000455473 307 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 LINC00888-204ENST00000487386 421 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC092045.1-201ENST00000495716 1231 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 RN7SL143P-201ENST00000496780 297 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 CBX3P3-201ENST00000508108 532 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC008885.2-201ENST00000509506 930 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 RNA5SP278-201ENST00000517055 102 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms