Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 DUTP1-201ENST00000493631 470 ntBASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 AP000859.1-201ENST00000525536 307 ntBASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 ZNF322P1-201ENST00000568013 1209 ntBASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 AC092266.1-201ENST00000610958 165 ntBASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLHC1Q8NHS4 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 AF287957.1-201ENST00000607368 1595 ntBASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 AC093225.1-201ENST00000506867 1408 ntBASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 GNG5P5-201ENST00000420444 220 ntBASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 BX119904.3-201ENST00000428194 957 ntBASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 GAPDHP48-201ENST00000436626 961 ntBASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 RPL12P18-201ENST00000437175 325 ntBASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 ATP5LP2-201ENST00000440646 311 ntBASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 RPL6P30-201ENST00000443382 862 ntBASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 RBMY2AP-201ENST00000445405 1157 ntBASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 RBMY2CP-201ENST00000448575 1157 ntBASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 RBMY2DP-202ENST00000448881 1157 ntBASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 RBMY2BP-202ENST00000451071 1156 ntBASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 GEMIN2P1-201ENST00000454246 752 ntBASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 AC104339.1-201ENST00000465478 348 ntBASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 AC021146.10-201ENST00000515628 706 ntBASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 RNA5SP340-201ENST00000517132 107 ntBASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 AC090286.3-201ENST00000573133 187 ntBASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 MIR4776-2-201ENST00000580204 80 ntBASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 AC002069.2-201ENST00000603580 883 ntBASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 AL035661.1-201ENST00000620459 1144 ntBASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 MTCO1P46-201ENST00000451639 1491 ntBASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CLHC1Q8NHS4 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 AL353796.1-201ENST00000561542 3241 ntBASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 QRSL1P1-201ENST00000400977 1540 ntBASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 MTCO1P15-201ENST00000529569 1526 ntBASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 AC090181.3-201ENST00000624777 1514 ntBASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms