Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDND2Q8NHS1 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLDND2Q8NHS1 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CLDND2Q8NHS1 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.95□□□□□ -1.62
CLDND2Q8NHS1 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLDND2Q8NHS1 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLDND2Q8NHS1 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 PTCD2P2-201ENST00000415579 1095 ntBASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 AL158827.1-201ENST00000416300 391 ntBASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 SUMO2P3-201ENST00000438311 288 ntBASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 AL049779.3-201ENST00000557141 606 ntBASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 AC091078.2-201ENST00000557145 559 ntBASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 RNA5SP440-201ENST00000612665 119 ntBASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 AL049767.1-202ENST00000637826 242 ntBASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 MIR193BHG-214ENST00000641765 509 ntBASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 AC004158.1-201ENST00000564508 4319 ntBASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 AC016583.1-201ENST00000624221 2431 ntBASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLDND2Q8NHS1 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 AL513325.1-201ENST00000417716 1034 ntBASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 AK4P4-201ENST00000419465 646 ntBASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 RPL34P3-201ENST00000421454 338 ntBASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 AC099677.3-201ENST00000427081 395 ntBASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 AL590399.4-201ENST00000436561 601 ntBASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 RPSAP39-201ENST00000467439 883 ntBASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 RPL23AP40-201ENST00000487630 390 ntBASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 TRBV5-2-201ENST00000489095 273 ntBASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 CCDC11P1-201ENST00000503137 1162 ntBASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 NENFP3-201ENST00000503735 313 ntBASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 RPL7L1P4-201ENST00000513004 707 ntBASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 OR8Q1P-201ENST00000526467 655 ntBASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 HMGN2P36-201ENST00000529541 409 ntBASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 AC125612.1-201ENST00000547580 377 ntBASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 AC010547.6-201ENST00000571789 193 ntBASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 SNORD95-201ENST00000579879 68 ntBASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 AC015802.2-201ENST00000589690 189 ntBASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 FAM72A-208ENST00000607379 1139 ntBASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 AC079776.5-201ENST00000641920 211 ntBASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 NSF-206ENST00000575068 2667 ntTSL 2 BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 AC114774.1-201ENST00000507410 1770 ntBASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 AC063923.1-201ENST00000478982 1619 ntBASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLDND2Q8NHS1 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms