Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC092999.1-201ENST00000624004 1924 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 TUBBP10-201ENST00000427668 1301 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 RNU5F-7P-201ENST00000363696 115 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 RNU6-374P-201ENST00000364146 108 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 Y_RNA.302-201ENST00000364997 102 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 RNU6-31P-201ENST00000384388 108 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 RNU6-780P-201ENST00000391030 104 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 SNORD65-201ENST00000391079 73 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 MTCO3P40-201ENST00000392516 676 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC098592.2-201ENST00000413158 265 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 EEF1A1P34-201ENST00000419888 1267 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 RHEBP1-201ENST00000448647 556 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC022730.2-201ENST00000465359 452 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 RPL7P17-201ENST00000470927 724 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC096576.1-201ENST00000489014 359 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC122718.2-201ENST00000505325 591 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 OR5M14P-201ENST00000506803 618 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC006070.1-201ENST00000508151 193 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC233724.10-201ENST00000510454 409 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC005832.3-201ENST00000537929 631 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 ARL2BPP2-201ENST00000550907 489 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC103968.1-201ENST00000557841 573 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 STX8-209ENST00000574431 731 ntTSL 3 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 MIR4786-201ENST00000583954 80 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC106900.2-201ENST00000604994 317 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC004852.1-201ENST00000605206 154 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AL359535.1-201ENST00000612100 1087 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AL592295.2-201ENST00000612578 206 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 pRNA.12-201ENST00000614353 90 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 pRNA.3-201ENST00000615048 90 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 OR8G7P-201ENST00000616658 848 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC008121.3-201ENST00000618726 433 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC069209.1-201ENST00000619282 651 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC073348.1-201ENST00000623002 331 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 ABBA01000935.2-201ENST00000637477 838 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 AC007342.7-201ENST00000624610 2337 ntBASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LYSMD3Q7Z3D4 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 COL6A4P1-202ENST00000487147 4317 ntBASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 SALL1P1-201ENST00000438101 3837 ntBASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 MFSD8-218ENST00000641186 4448 ntBASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 RNU4-79P-201ENST00000362764 141 ntBASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 Y_RNA.142-201ENST00000363491 102 ntBASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 Y_RNA.279-201ENST00000364763 95 ntBASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 Y_RNA.394-201ENST00000383942 103 ntBASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 RNU6-297P-201ENST00000384636 107 ntBASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 AC007066.1-201ENST00000392902 381 ntBASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 CALM2P3-201ENST00000400429 449 ntBASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC7.61□□□□□ -1.19
LYSMD3Q7Z3D4 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms