Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 ATP5LP2-201ENST00000440646 311 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 RPSAP40-201ENST00000442343 891 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 RPL6P30-201ENST00000443382 862 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AC098847.1-201ENST00000473094 348 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AC079080.1-201ENST00000479841 822 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 PRMT5P1-201ENST00000514351 598 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 Vault.2-201ENST00000516519 98 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 SCARNA1-201ENST00000517138 166 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AL121594.2-201ENST00000541658 472 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 RPA2P1-201ENST00000556557 721 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AP001357.1-201ENST00000586304 1053 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AL136131.3-201ENST00000607600 188 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AC063944.3-201ENST00000609969 533 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AL352984.2-201ENST00000611153 546 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AC000095.2-202ENST00000637415 154 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AP001153.1-201ENST00000641024 338 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AL512283.1-201ENST00000606756 1384 ntBASIC5.8□□□□□ -1.48
ZNF549Q6P9A3 AC138907.8-201ENST00000623981 2256 ntBASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 AL121839.2-201ENST00000565058 6943 ntBASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 RNU11-201ENST00000387069 134 ntBASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 AC007679.3-201ENST00000434035 414 ntBASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 ZFAND6P1-201ENST00000434138 605 ntBASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 AL645638.1-201ENST00000440519 361 ntBASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 AC093166.3-201ENST00000448785 303 ntBASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 PPIAP27-201ENST00000453800 265 ntBASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 AC009963.3-201ENST00000458090 486 ntBASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 AC023194.2-201ENST00000465398 406 ntBASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 RN7SL193P-201ENST00000491708 276 ntBASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 CCNHP1-201ENST00000513311 678 ntBASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 IGLV3-30-201ENST00000524362 298 ntBASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 AP001372.4-201ENST00000524889 472 ntBASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 AL360012.1-201ENST00000602813 131 ntBASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 AL133481.2-203ENST00000607558 139 ntBASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 AL591926.1-201ENST00000620542 217 ntBASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 AL356490.1-201ENST00000623079 479 ntBASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 CCAT2-201ENST00000630920 1752 ntBASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms