Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RFX7Q2KHR2 YES1P1-201ENST00000418510 1628 ntBASIC6.9□□□□□ -1.3
RFX7Q2KHR2 MRE11P1-201ENST00000464884 2127 ntBASIC6.9□□□□□ -1.3
RFX7Q2KHR2 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
RFX7Q2KHR2 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
RFX7Q2KHR2 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
RFX7Q2KHR2 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.9□□□□□ -1.3
RFX7Q2KHR2 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RFX7Q2KHR2 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RFX7Q2KHR2 RNA5SP131-201ENST00000365452 119 ntBASIC6.9□□□□□ -1.31
RFX7Q2KHR2 RNU6-171P-201ENST00000384354 107 ntBASIC6.9□□□□□ -1.31
RFX7Q2KHR2 OR2AT2P-201ENST00000413438 905 ntBASIC6.9□□□□□ -1.31
RFX7Q2KHR2 NPM1P4-201ENST00000414095 812 ntBASIC6.9□□□□□ -1.31
RFX7Q2KHR2 OR6E1P-201ENST00000414424 923 ntBASIC6.9□□□□□ -1.31
RFX7Q2KHR2 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.9□□□□□ -1.31
RFX7Q2KHR2 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.9□□□□□ -1.31
RFX7Q2KHR2 AC012075.1-201ENST00000436549 580 ntBASIC6.9□□□□□ -1.31
RFX7Q2KHR2 MEMO1P4-201ENST00000453590 386 ntBASIC6.9□□□□□ -1.31
RFX7Q2KHR2 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RFX7Q2KHR2 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.9□□□□□ -1.31
RFX7Q2KHR2 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.9□□□□□ -1.31
RFX7Q2KHR2 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.9□□□□□ -1.31
RFX7Q2KHR2 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.9□□□□□ -1.31
RFX7Q2KHR2 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.9□□□□□ -1.31
RFX7Q2KHR2 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.9□□□□□ -1.31
RFX7Q2KHR2 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.9□□□□□ -1.31
RFX7Q2KHR2 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.9□□□□□ -1.31
RFX7Q2KHR2 AC007204.2-201ENST00000615022 616 ntBASIC6.9□□□□□ -1.31
RFX7Q2KHR2 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.9□□□□□ -1.31
RFX7Q2KHR2 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RFX7Q2KHR2 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RFX7Q2KHR2 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
RFX7Q2KHR2 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.31
RFX7Q2KHR2 AC006206.1-201ENST00000544842 3387 ntBASIC6.9□□□□□ -1.31
RFX7Q2KHR2 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RFX7Q2KHR2 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.9□□□□□ -1.31
RFX7Q2KHR2 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RFX7Q2KHR2 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.9□□□□□ -1.31
RFX7Q2KHR2 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RFX7Q2KHR2 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 ZNF658B-201ENST00000602828 3408 ntBASIC6.89□□□□□ -1.31
RFX7Q2KHR2 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 AP004607.3-201ENST00000530354 3915 ntBASIC6.89□□□□□ -1.31
RFX7Q2KHR2 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 NPM1P36-201ENST00000415681 835 ntBASIC6.89□□□□□ -1.31
RFX7Q2KHR2 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 RNF10P1-201ENST00000418589 369 ntBASIC6.89□□□□□ -1.31
RFX7Q2KHR2 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 OR10T1P-201ENST00000424327 947 ntBASIC6.89□□□□□ -1.31
RFX7Q2KHR2 AL390119.1-201ENST00000440329 312 ntBASIC6.89□□□□□ -1.31
RFX7Q2KHR2 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 RN7SL727P-201ENST00000482164 296 ntBASIC6.89□□□□□ -1.31
RFX7Q2KHR2 AC108693.1-201ENST00000496068 432 ntBASIC6.89□□□□□ -1.31
RFX7Q2KHR2 AC021146.10-201ENST00000515628 706 ntBASIC6.89□□□□□ -1.31
RFX7Q2KHR2 SCARNA6.1-201ENST00000516989 238 ntBASIC6.89□□□□□ -1.31
RFX7Q2KHR2 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.89□□□□□ -1.31
RFX7Q2KHR2 MIR4311-201ENST00000580794 100 ntBASIC6.89□□□□□ -1.31
RFX7Q2KHR2 AC090607.5-201ENST00000615692 224 ntBASIC6.89□□□□□ -1.31
RFX7Q2KHR2 AC018445.2-201ENST00000622987 260 ntBASIC6.89□□□□□ -1.31
RFX7Q2KHR2 GTF2IP4-201ENST00000453092 2054 ntBASIC6.89□□□□□ -1.31
RFX7Q2KHR2 AC092070.2-203ENST00000598377 3644 ntBASIC6.89□□□□□ -1.31
RFX7Q2KHR2 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.89□□□□□ -1.31
RFX7Q2KHR2 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
RFX7Q2KHR2 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RFX7Q2KHR2 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RFX7Q2KHR2 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.88□□□□□ -1.31
RFX7Q2KHR2 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RFX7Q2KHR2 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.88□□□□□ -1.31
RFX7Q2KHR2 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
RFX7Q2KHR2 RN7SKP17-201ENST00000411242 351 ntBASIC6.88□□□□□ -1.31
RFX7Q2KHR2 GABARAPL3-201ENST00000412799 354 ntBASIC6.88□□□□□ -1.31
RFX7Q2KHR2 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.88□□□□□ -1.31
RFX7Q2KHR2 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.88□□□□□ -1.31
RFX7Q2KHR2 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.88□□□□□ -1.31
RFX7Q2KHR2 AC005297.1-201ENST00000444765 862 ntBASIC6.88□□□□□ -1.31
RFX7Q2KHR2 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RFX7Q2KHR2 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.88□□□□□ -1.31
RFX7Q2KHR2 SNORD125-201ENST00000459538 96 ntBASIC6.88□□□□□ -1.31
RFX7Q2KHR2 RN7SL184P-201ENST00000488308 297 ntBASIC6.88□□□□□ -1.31
RFX7Q2KHR2 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms