Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RNA5SP183-201ENST00000362452 119 ntBASIC6.67□□□□□ -1.34
GABPAQ06546 AL121977.1-201ENST00000401636 979 ntBASIC6.67□□□□□ -1.34
GABPAQ06546 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.67□□□□□ -1.34
GABPAQ06546 AC073410.1-201ENST00000435125 589 ntBASIC6.67□□□□□ -1.34
GABPAQ06546 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.67□□□□□ -1.34
GABPAQ06546 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.67□□□□□ -1.34
GABPAQ06546 AC007386.1-201ENST00000455212 582 ntBASIC6.67□□□□□ -1.34
GABPAQ06546 AC110749.1-201ENST00000462007 357 ntBASIC6.67□□□□□ -1.34
GABPAQ06546 AC100832.1-201ENST00000471945 383 ntBASIC6.67□□□□□ -1.34
GABPAQ06546 AC079080.1-201ENST00000479841 822 ntBASIC6.67□□□□□ -1.34
GABPAQ06546 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.67□□□□□ -1.34
GABPAQ06546 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.67□□□□□ -1.34
GABPAQ06546 AGGF1P7-201ENST00000562369 913 ntBASIC6.67□□□□□ -1.34
GABPAQ06546 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.67□□□□□ -1.34
GABPAQ06546 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
GABPAQ06546 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.67□□□□□ -1.34
GABPAQ06546 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.67□□□□□ -1.34
GABPAQ06546 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.67□□□□□ -1.34
GABPAQ06546 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
GABPAQ06546 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.67□□□□□ -1.34
GABPAQ06546 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
GABPAQ06546 ZNF101P1-201ENST00000435701 1720 ntBASIC6.67□□□□□ -1.34
GABPAQ06546 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
GABPAQ06546 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.67□□□□□ -1.34
GABPAQ06546 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
GABPAQ06546 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
GABPAQ06546 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.66□□□□□ -1.34
GABPAQ06546 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
GABPAQ06546 MAPK10-261ENST00000641050 3109 ntBASIC6.66□□□□□ -1.34
GABPAQ06546 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
GABPAQ06546 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.66□□□□□ -1.34
GABPAQ06546 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.66□□□□□ -1.34
GABPAQ06546 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
GABPAQ06546 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
GABPAQ06546 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
GABPAQ06546 RN7SKP279-201ENST00000411383 298 ntBASIC6.66□□□□□ -1.34
GABPAQ06546 RPS6P23-201ENST00000413224 722 ntBASIC6.66□□□□□ -1.34
GABPAQ06546 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.66□□□□□ -1.34
GABPAQ06546 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.66□□□□□ -1.34
GABPAQ06546 VN1R21P-201ENST00000426703 765 ntBASIC6.66□□□□□ -1.34
GABPAQ06546 CRIP1P1-201ENST00000427567 185 ntBASIC6.66□□□□□ -1.34
GABPAQ06546 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.66□□□□□ -1.34
GABPAQ06546 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.66□□□□□ -1.34
GABPAQ06546 RSU1P1-201ENST00000453416 441 ntBASIC6.66□□□□□ -1.34
GABPAQ06546 RN7SL583P-201ENST00000475692 287 ntBASIC6.66□□□□□ -1.34
GABPAQ06546 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.66□□□□□ -1.34
GABPAQ06546 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.66□□□□□ -1.34
GABPAQ06546 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.66□□□□□ -1.34
GABPAQ06546 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.66□□□□□ -1.34
GABPAQ06546 SUGT1P3-202ENST00000604259 383 ntBASIC6.66□□□□□ -1.34
GABPAQ06546 SUMO2P15-201ENST00000604285 278 ntBASIC6.66□□□□□ -1.34
GABPAQ06546 NANOGP3-201ENST00000605855 286 ntBASIC6.66□□□□□ -1.34
GABPAQ06546 AC025574.2-201ENST00000615621 514 ntBASIC6.66□□□□□ -1.34
GABPAQ06546 MIR8080-201ENST00000622224 89 ntBASIC6.66□□□□□ -1.34
GABPAQ06546 AC132068.1-201ENST00000623805 459 ntBASIC6.66□□□□□ -1.34
GABPAQ06546 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.66□□□□□ -1.34
GABPAQ06546 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
GABPAQ06546 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.66□□□□□ -1.34
GABPAQ06546 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
GABPAQ06546 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.66□□□□□ -1.34
GABPAQ06546 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
GABPAQ06546 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.66□□□□□ -1.34
GABPAQ06546 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
GABPAQ06546 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
GABPAQ06546 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
GABPAQ06546 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.65□□□□□ -1.34
GABPAQ06546 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
GABPAQ06546 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.65□□□□□ -1.34
GABPAQ06546 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
GABPAQ06546 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
GABPAQ06546 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
GABPAQ06546 OR9K1P-201ENST00000326513 941 ntBASIC6.65□□□□□ -1.34
GABPAQ06546 GAPDHP24-201ENST00000328713 983 ntBASIC6.65□□□□□ -1.34
GABPAQ06546 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.65□□□□□ -1.34
GABPAQ06546 RN7SKP278-201ENST00000410504 342 ntBASIC6.65□□□□□ -1.34
GABPAQ06546 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.65□□□□□ -1.34
GABPAQ06546 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.65□□□□□ -1.34
GABPAQ06546 OR6D1P-201ENST00000436165 939 ntBASIC6.65□□□□□ -1.34
GABPAQ06546 AL390879.1-201ENST00000439143 386 ntBASIC6.65□□□□□ -1.34
GABPAQ06546 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.65□□□□□ -1.34
GABPAQ06546 AC090638.1-201ENST00000498296 909 ntBASIC6.65□□□□□ -1.34
GABPAQ06546 AC008638.1-201ENST00000506035 866 ntBASIC6.65□□□□□ -1.34
GABPAQ06546 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.65□□□□□ -1.34
GABPAQ06546 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.65□□□□□ -1.34
GABPAQ06546 AC139697.1-201ENST00000548429 745 ntBASIC6.65□□□□□ -1.34
GABPAQ06546 MIR4311-201ENST00000580794 100 ntBASIC6.65□□□□□ -1.34
GABPAQ06546 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC6.65□□□□□ -1.34
GABPAQ06546 FKBP1AP1-201ENST00000594588 318 ntBASIC6.65□□□□□ -1.34
GABPAQ06546 AC012616.1-201ENST00000600294 197 ntBASIC6.65□□□□□ -1.34
GABPAQ06546 AC018659.2-201ENST00000624690 715 ntBASIC6.65□□□□□ -1.34
GABPAQ06546 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.65□□□□□ -1.34
GABPAQ06546 AC079753.1-201ENST00000623243 3868 ntBASIC6.65□□□□□ -1.34
GABPAQ06546 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
GABPAQ06546 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
GABPAQ06546 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
GABPAQ06546 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.65□□□□□ -1.35
GABPAQ06546 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
GABPAQ06546 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.65□□□□□ -1.35
GABPAQ06546 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
GABPAQ06546 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms