Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 PTP4A1P1-201ENST00000420539 515 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 AC007562.1-201ENST00000421819 517 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC4.93□□□□□ -1.62
CX3CL1P78423 AL121882.1-201ENST00000422893 417 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC4.93□□□□□ -1.62
CX3CL1P78423 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CL1P78423 RPSAP32-201ENST00000432681 526 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 RPL5P10-201ENST00000445207 894 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 AC023274.2-201ENST00000445264 521 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CL1P78423 HIGD1AP16-201ENST00000450986 258 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC4.93□□□□□ -1.62
CX3CL1P78423 AL445687.2-201ENST00000458156 728 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 AL022319.1-201ENST00000458183 1167 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC4.93□□□□□ -1.62
CX3CL1P78423 RPSAP37-201ENST00000470913 821 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 SNX18P24-201ENST00000505249 671 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 AC021146.7-201ENST00000509604 775 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 AC095052.1-201ENST00000509955 863 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC4.93□□□□□ -1.62
CX3CL1P78423 SNX18P25-201ENST00000510539 758 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC4.93□□□□□ -1.62
CX3CL1P78423 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC4.93□□□□□ -1.62
CX3CL1P78423 SNORA76.2-201ENST00000517095 137 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 VTA1P2-201ENST00000520205 911 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 AC019227.1-201ENST00000526902 510 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 AP003033.2-201ENST00000528901 805 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 NPIPB14P-203ENST00000532298 987 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 OR4A41P-201ENST00000533053 928 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 AP001858.2-201ENST00000536213 601 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.93□□□□□ -1.62
CX3CL1P78423 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CL1P78423 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.93□□□□□ -1.62
CX3CL1P78423 AC092865.1-201ENST00000544395 1023 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 AC008126.1-201ENST00000549019 480 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.93□□□□□ -1.62
CX3CL1P78423 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.93□□□□□ -1.62
CX3CL1P78423 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC4.93□□□□□ -1.62
CX3CL1P78423 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC4.93□□□□□ -1.62
CX3CL1P78423 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CL1P78423 AC106785.3-201ENST00000564064 847 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 AC233266.2-201ENST00000567067 528 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.93□□□□□ -1.62
CX3CL1P78423 AC011500.1-201ENST00000601963 469 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 RPSAP75-201ENST00000605848 301 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.93□□□□□ -1.62
CX3CL1P78423 AL096803.3-201ENST00000609032 532 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.93□□□□□ -1.62
CX3CL1P78423 AC003992.1-201ENST00000635364 557 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.93□□□□□ -1.62
CX3CL1P78423 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CX3CL1P78423 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CX3CL1P78423 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CL1P78423 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CL1P78423 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
CX3CL1P78423 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CL1P78423 AL133243.2-201ENST00000610331 1621 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CL1P78423 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CL1P78423 SSXP3-201ENST00000442971 1300 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CX3CL1P78423 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CL1P78423 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC4.93□□□□□ -1.62
CX3CL1P78423 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CX3CL1P78423 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CX3CL1P78423 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CX3CL1P78423 HDAC1P2-201ENST00000453661 1398 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CX3CL1P78423 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.92□□□□□ -1.62
CX3CL1P78423 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.92□□□□□ -1.62
CX3CL1P78423 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.92□□□□□ -1.62
CX3CL1P78423 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
CX3CL1P78423 AL359091.1-201ENST00000449048 1734 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
CX3CL1P78423 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC4.92□□□□□ -1.62
CX3CL1P78423 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.92□□□□□ -1.62
CX3CL1P78423 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CX3CL1P78423 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CX3CL1P78423 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CX3CL1P78423 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CX3CL1P78423 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CX3CL1P78423 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CX3CL1P78423 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.92□□□□□ -1.62
CX3CL1P78423 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CX3CL1P78423 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.92□□□□□ -1.62
CX3CL1P78423 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.92□□□□□ -1.62
CX3CL1P78423 MIR188-201ENST00000385034 86 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 RN7SKP17-201ENST00000411242 351 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 ARL2BPP3-201ENST00000421226 480 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC4.92□□□□□ -1.62
CX3CL1P78423 AC099782.1-201ENST00000425889 474 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 AC092651.1-201ENST00000426110 312 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 RPL12P16-201ENST00000431098 498 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 IGLV3-4-201ENST00000432300 244 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 AC013403.1-201ENST00000436954 263 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 AC096632.2-201ENST00000438139 1239 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.92□□□□□ -1.62
CX3CL1P78423 GAPDHP23-201ENST00000444823 993 ntBASIC4.92□□□□□ -1.62
CX3CL1P78423 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms