Protein–RNA interactions for Protein: P78317

RNF4, E3 ubiquitin-protein ligase RNF4, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4P78317 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.61□□□□□ -1.35
RNF4P78317 PTTG3P-201ENST00000521862 606 ntBASIC6.61□□□□□ -1.35
RNF4P78317 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF4P78317 AC107952.1-201ENST00000524200 376 ntBASIC6.61□□□□□ -1.35
RNF4P78317 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.61□□□□□ -1.35
RNF4P78317 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF4P78317 AL139174.1-201ENST00000531489 886 ntBASIC6.61□□□□□ -1.35
RNF4P78317 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF4P78317 AP000873.5-201ENST00000533906 236 ntBASIC6.61□□□□□ -1.35
RNF4P78317 AP001804.2-201ENST00000533932 910 ntBASIC6.61□□□□□ -1.35
RNF4P78317 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.61□□□□□ -1.35
RNF4P78317 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF4P78317 HNRNPCP1-201ENST00000556181 766 ntBASIC6.61□□□□□ -1.35
RNF4P78317 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF4P78317 AL512347.1-201ENST00000566420 503 ntBASIC6.61□□□□□ -1.35
RNF4P78317 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF4P78317 AC092032.1-201ENST00000603090 165 ntBASIC6.61□□□□□ -1.35
RNF4P78317 AC079089.3-201ENST00000603094 673 ntBASIC6.61□□□□□ -1.35
RNF4P78317 AL513477.2-201ENST00000607858 568 ntBASIC6.61□□□□□ -1.35
RNF4P78317 AC108673.3-201ENST00000609183 335 ntBASIC6.61□□□□□ -1.35
RNF4P78317 AP005329.3-201ENST00000609924 686 ntBASIC6.61□□□□□ -1.35
RNF4P78317 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF4P78317 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.61□□□□□ -1.35
RNF4P78317 AC027506.1-201ENST00000621395 198 ntBASIC6.61□□□□□ -1.35
RNF4P78317 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF4P78317 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF4P78317 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
RNF4P78317 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF4P78317 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF4P78317 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF4P78317 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
RNF4P78317 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF4P78317 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF4P78317 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF4P78317 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
RNF4P78317 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RNF4P78317 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.61□□□□□ -1.35
RNF4P78317 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RNF4P78317 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF4P78317 AL358913.2-201ENST00000553881 1548 ntBASIC6.6□□□□□ -1.35
RNF4P78317 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RNF4P78317 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RNF4P78317 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
RNF4P78317 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
RNF4P78317 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RNF4P78317 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RNF4P78317 UG0898H09-202ENST00000623646 7040 ntBASIC6.6□□□□□ -1.35
RNF4P78317 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RNF4P78317 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.6□□□□□ -1.35
RNF4P78317 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RNF4P78317 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.6□□□□□ -1.35
RNF4P78317 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.6□□□□□ -1.35
RNF4P78317 AL672167.1-206ENST00000356293 943 ntBASIC6.6□□□□□ -1.35
RNF4P78317 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RNF4P78317 RNU6-560P-201ENST00000364007 108 ntBASIC6.6□□□□□ -1.35
RNF4P78317 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RNF4P78317 AL672167.2-201ENST00000377164 879 ntBASIC6.6□□□□□ -1.35
RNF4P78317 MIR27A-201ENST00000385073 78 ntBASIC6.6□□□□□ -1.35
RNF4P78317 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
RNF4P78317 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
RNF4P78317 AC093719.1-202ENST00000392735 373 ntBASIC6.6□□□□□ -1.35
RNF4P78317 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RNF4P78317 RN7SKP254-201ENST00000410685 310 ntBASIC6.6□□□□□ -1.35
RNF4P78317 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.6□□□□□ -1.35
RNF4P78317 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
RNF4P78317 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.6□□□□□ -1.35
RNF4P78317 MICG-208ENST00000416822 132 ntBASIC6.6□□□□□ -1.35
RNF4P78317 DNAJA1P2-201ENST00000421360 1197 ntBASIC6.6□□□□□ -1.35
RNF4P78317 GTF2IP23-201ENST00000423746 351 ntBASIC6.6□□□□□ -1.35
RNF4P78317 DPRXP1-201ENST00000426312 460 ntBASIC6.6□□□□□ -1.35
RNF4P78317 AC092646.1-201ENST00000427142 901 ntBASIC6.6□□□□□ -1.35
RNF4P78317 E2F6P1-201ENST00000428850 745 ntBASIC6.6□□□□□ -1.35
RNF4P78317 AL354983.1-201ENST00000434580 906 ntBASIC6.6□□□□□ -1.35
RNF4P78317 AC234064.1-201ENST00000436312 247 ntBASIC6.6□□□□□ -1.35
RNF4P78317 E2F6P3-201ENST00000441743 743 ntBASIC6.6□□□□□ -1.35
RNF4P78317 AC005002.1-201ENST00000447458 540 ntBASIC6.6□□□□□ -1.35
RNF4P78317 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
RNF4P78317 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.6□□□□□ -1.35
RNF4P78317 CALM1P2-201ENST00000452941 448 ntBASIC6.6□□□□□ -1.35
RNF4P78317 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.6□□□□□ -1.35
RNF4P78317 RPL36AP55-201ENST00000454114 305 ntBASIC6.6□□□□□ -1.35
RNF4P78317 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.6□□□□□ -1.35
RNF4P78317 SRP68P2-201ENST00000456184 254 ntBASIC6.6□□□□□ -1.35
RNF4P78317 BX323845.2-201ENST00000458382 234 ntBASIC6.6□□□□□ -1.35
RNF4P78317 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC6.6□□□□□ -1.35
RNF4P78317 RN7SL149P-201ENST00000465197 281 ntBASIC6.6□□□□□ -1.35
RNF4P78317 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.6□□□□□ -1.35
RNF4P78317 AC091959.2-201ENST00000477363 321 ntBASIC6.6□□□□□ -1.35
RNF4P78317 RPL7P18-201ENST00000478965 734 ntBASIC6.6□□□□□ -1.35
RNF4P78317 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RNF4P78317 CBX3P3-201ENST00000508108 532 ntBASIC6.6□□□□□ -1.35
RNF4P78317 RPL7L1P7-201ENST00000509986 724 ntBASIC6.6□□□□□ -1.35
RNF4P78317 AC079140.3-201ENST00000511111 550 ntBASIC6.6□□□□□ -1.35
RNF4P78317 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.6□□□□□ -1.35
RNF4P78317 TBCA-206ENST00000518338 551 ntTSL 2 BASIC6.6□□□□□ -1.35
RNF4P78317 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.6□□□□□ -1.35
RNF4P78317 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC6.6□□□□□ -1.35
RNF4P78317 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC6.6□□□□□ -1.35
RNF4P78317 MIR3912-201ENST00000577566 105 ntBASIC6.6□□□□□ -1.35
RNF4P78317 MIR3135A-201ENST00000578460 77 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms