Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LMO4P61968 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LMO4P61968 CR788268.1-201ENST00000603931 1809 ntBASIC4.81□□□□□ -1.64
LMO4P61968 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
LMO4P61968 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC4.81□□□□□ -1.64
LMO4P61968 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC4.81□□□□□ -1.64
LMO4P61968 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC4.81□□□□□ -1.64
LMO4P61968 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
LMO4P61968 AC241584.2-201ENST00000637142 2090 ntBASIC4.81□□□□□ -1.64
LMO4P61968 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC4.81□□□□□ -1.64
LMO4P61968 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
LMO4P61968 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LMO4P61968 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
LMO4P61968 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
LMO4P61968 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LMO4P61968 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LMO4P61968 DPY19L1P1-201ENST00000417811 2594 ntBASIC4.8□□□□□ -1.64
LMO4P61968 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.8□□□□□ -1.64
LMO4P61968 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LMO4P61968 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.8□□□□□ -1.64
LMO4P61968 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.8□□□□□ -1.64
LMO4P61968 AC022417.1-201ENST00000624768 1303 ntBASIC4.8□□□□□ -1.64
LMO4P61968 AC022034.1-201ENST00000512867 2156 ntBASIC4.8□□□□□ -1.64
LMO4P61968 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
LMO4P61968 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC4.8□□□□□ -1.64
LMO4P61968 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LMO4P61968 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC4.8□□□□□ -1.64
LMO4P61968 OR5T3-201ENST00000303059 1023 ntBASIC4.8□□□□□ -1.64
LMO4P61968 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LMO4P61968 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LMO4P61968 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LMO4P61968 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LMO4P61968 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.8□□□□□ -1.64
LMO4P61968 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LMO4P61968 OR2W4P-201ENST00000406496 926 ntBASIC4.8□□□□□ -1.64
LMO4P61968 AL357752.1-201ENST00000412817 349 ntBASIC4.8□□□□□ -1.64
LMO4P61968 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.8□□□□□ -1.64
LMO4P61968 OR6E1P-201ENST00000414424 923 ntBASIC4.8□□□□□ -1.64
LMO4P61968 MTND4LP21-201ENST00000415303 295 ntBASIC4.8□□□□□ -1.64
LMO4P61968 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.8□□□□□ -1.64
LMO4P61968 BX510359.3-201ENST00000422168 306 ntBASIC4.8□□□□□ -1.64
LMO4P61968 SETP10-201ENST00000424368 814 ntBASIC4.8□□□□□ -1.64
LMO4P61968 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.8□□□□□ -1.64
LMO4P61968 GAPDHP48-201ENST00000436626 961 ntBASIC4.8□□□□□ -1.64
LMO4P61968 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.8□□□□□ -1.64
LMO4P61968 NPM1P19-201ENST00000450070 712 ntBASIC4.8□□□□□ -1.64
LMO4P61968 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.8□□□□□ -1.64
LMO4P61968 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.8□□□□□ -1.64
LMO4P61968 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.8□□□□□ -1.64
LMO4P61968 RPL32P33-201ENST00000487023 394 ntBASIC4.8□□□□□ -1.64
LMO4P61968 RPL17P2-201ENST00000491913 451 ntBASIC4.8□□□□□ -1.64
LMO4P61968 EIF3LP3-201ENST00000495197 822 ntBASIC4.8□□□□□ -1.64
LMO4P61968 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LMO4P61968 AC113398.2-201ENST00000507630 558 ntBASIC4.8□□□□□ -1.64
LMO4P61968 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.8□□□□□ -1.64
LMO4P61968 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.8□□□□□ -1.64
LMO4P61968 SNORD116-30-201ENST00000516468 85 ntBASIC4.8□□□□□ -1.64
LMO4P61968 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.8□□□□□ -1.64
LMO4P61968 AC008429.4-201ENST00000521201 182 ntBASIC4.8□□□□□ -1.64
LMO4P61968 MTND1P36-201ENST00000522384 936 ntBASIC4.8□□□□□ -1.64
LMO4P61968 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.8□□□□□ -1.64
LMO4P61968 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.8□□□□□ -1.64
LMO4P61968 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.8□□□□□ -1.64
LMO4P61968 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LMO4P61968 AL049872.1-201ENST00000556323 322 ntBASIC4.8□□□□□ -1.64
LMO4P61968 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.8□□□□□ -1.64
LMO4P61968 MIR1273E-201ENST00000581165 102 ntBASIC4.8□□□□□ -1.64
LMO4P61968 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.8□□□□□ -1.64
LMO4P61968 AC063977.5-201ENST00000601044 974 ntBASIC4.8□□□□□ -1.64
LMO4P61968 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.8□□□□□ -1.64
LMO4P61968 AC008115.3-201ENST00000614874 549 ntBASIC4.8□□□□□ -1.64
LMO4P61968 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.8□□□□□ -1.64
LMO4P61968 AC007683.2-201ENST00000624681 714 ntBASIC4.8□□□□□ -1.64
LMO4P61968 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LMO4P61968 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LMO4P61968 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LMO4P61968 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LMO4P61968 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC4.8□□□□□ -1.64
LMO4P61968 CASC19-243ENST00000641588 1546 ntBASIC4.8□□□□□ -1.64
LMO4P61968 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
LMO4P61968 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
LMO4P61968 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LMO4P61968 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LMO4P61968 ZNF101P1-201ENST00000435701 1720 ntBASIC4.8□□□□□ -1.64
LMO4P61968 AL513548.1-201ENST00000562904 1724 ntBASIC4.8□□□□□ -1.64
LMO4P61968 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LMO4P61968 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.8□□□□□ -1.64
LMO4P61968 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.8□□□□□ -1.64
LMO4P61968 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LMO4P61968 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LMO4P61968 SRRM1P3-201ENST00000426911 2678 ntBASIC4.79□□□□□ -1.64
LMO4P61968 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
LMO4P61968 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC4.79□□□□□ -1.64
LMO4P61968 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LMO4P61968 YES1P1-201ENST00000418510 1628 ntBASIC4.79□□□□□ -1.64
LMO4P61968 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LMO4P61968 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC4.79□□□□□ -1.64
LMO4P61968 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LMO4P61968 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LMO4P61968 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms