Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 NPM1P38-201ENST00000403835 865 ntBASIC5.54□□□□□ -1.52
VSX2P58304 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VSX2P58304 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.54□□□□□ -1.52
VSX2P58304 RPS3AP38-201ENST00000435889 763 ntBASIC5.54□□□□□ -1.52
VSX2P58304 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VSX2P58304 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.54□□□□□ -1.52
VSX2P58304 OSTCP1-201ENST00000455507 450 ntBASIC5.54□□□□□ -1.52
VSX2P58304 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.54□□□□□ -1.52
VSX2P58304 AC104109.1-201ENST00000498563 436 ntBASIC5.54□□□□□ -1.52
VSX2P58304 SCARNA6.1-201ENST00000516989 238 ntBASIC5.54□□□□□ -1.52
VSX2P58304 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.54□□□□□ -1.52
VSX2P58304 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.54□□□□□ -1.52
VSX2P58304 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.54□□□□□ -1.52
VSX2P58304 AP001496.3-201ENST00000580230 913 ntBASIC5.54□□□□□ -1.52
VSX2P58304 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.54□□□□□ -1.52
VSX2P58304 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.54□□□□□ -1.52
VSX2P58304 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.54□□□□□ -1.52
VSX2P58304 AP001267.4-201ENST00000602598 545 ntBASIC5.54□□□□□ -1.52
VSX2P58304 AC127024.6-201ENST00000621598 424 ntBASIC5.54□□□□□ -1.52
VSX2P58304 AL512356.3-201ENST00000623005 461 ntBASIC5.54□□□□□ -1.52
VSX2P58304 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.54□□□□□ -1.52
VSX2P58304 MIR193BHG-214ENST00000641765 509 ntBASIC5.54□□□□□ -1.52
VSX2P58304 MAPK10-350ENST00000641777 965 ntBASIC5.54□□□□□ -1.52
VSX2P58304 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VSX2P58304 AC005224.3-201ENST00000584683 2140 ntBASIC5.54□□□□□ -1.52
VSX2P58304 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VSX2P58304 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
VSX2P58304 RNF19BPY-201ENST00000458209 1550 ntBASIC5.54□□□□□ -1.52
VSX2P58304 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.54□□□□□ -1.52
VSX2P58304 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VSX2P58304 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
VSX2P58304 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VSX2P58304 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VSX2P58304 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VSX2P58304 FBXL21-201ENST00000297158 1305 ntBASIC5.53□□□□□ -1.52
VSX2P58304 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
VSX2P58304 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
VSX2P58304 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VSX2P58304 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VSX2P58304 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
VSX2P58304 AL078595.2-201ENST00000605309 1780 ntBASIC5.53□□□□□ -1.52
VSX2P58304 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VSX2P58304 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VSX2P58304 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.53□□□□□ -1.52
VSX2P58304 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
VSX2P58304 HMGB1P20-201ENST00000402555 677 ntBASIC5.53□□□□□ -1.52
VSX2P58304 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.53□□□□□ -1.52
VSX2P58304 AL357752.1-201ENST00000412817 349 ntBASIC5.53□□□□□ -1.52
VSX2P58304 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.53□□□□□ -1.52
VSX2P58304 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.53□□□□□ -1.52
VSX2P58304 AC019205.1-201ENST00000421830 730 ntBASIC5.53□□□□□ -1.52
VSX2P58304 AC127526.2-201ENST00000426436 775 ntBASIC5.53□□□□□ -1.52
VSX2P58304 AC104843.2-201ENST00000427666 297 ntBASIC5.53□□□□□ -1.52
VSX2P58304 HMGB3P24-201ENST00000433260 622 ntBASIC5.53□□□□□ -1.52
VSX2P58304 AC015983.1-201ENST00000441577 373 ntBASIC5.53□□□□□ -1.52
VSX2P58304 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.53□□□□□ -1.52
VSX2P58304 AC004129.2-201ENST00000457229 287 ntBASIC5.53□□□□□ -1.52
VSX2P58304 AC079080.1-201ENST00000479841 822 ntBASIC5.53□□□□□ -1.52
VSX2P58304 PPIAP19-201ENST00000486414 492 ntBASIC5.53□□□□□ -1.52
VSX2P58304 RPL32P33-201ENST00000487023 394 ntBASIC5.53□□□□□ -1.52
VSX2P58304 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.53□□□□□ -1.52
VSX2P58304 TOMM22P4-201ENST00000511318 336 ntBASIC5.53□□□□□ -1.52
VSX2P58304 IGLVIV-64-201ENST00000518581 301 ntBASIC5.53□□□□□ -1.52
VSX2P58304 IGKV3D-34-201ENST00000522638 302 ntBASIC5.53□□□□□ -1.52
VSX2P58304 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.53□□□□□ -1.52
VSX2P58304 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.53□□□□□ -1.52
VSX2P58304 AP000619.2-201ENST00000546014 969 ntBASIC5.53□□□□□ -1.52
VSX2P58304 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
VSX2P58304 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.53□□□□□ -1.52
VSX2P58304 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.53□□□□□ -1.52
VSX2P58304 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.53□□□□□ -1.52
VSX2P58304 AC023389.2-201ENST00000580031 955 ntBASIC5.53□□□□□ -1.52
VSX2P58304 RN7SL753P-201ENST00000581238 290 ntBASIC5.53□□□□□ -1.52
VSX2P58304 MIR4433B-201ENST00000581329 102 ntBASIC5.53□□□□□ -1.52
VSX2P58304 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.53□□□□□ -1.52
VSX2P58304 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VSX2P58304 AL357153.4-201ENST00000620487 1016 ntBASIC5.53□□□□□ -1.52
VSX2P58304 AC022919.1-201ENST00000624979 626 ntBASIC5.53□□□□□ -1.52
VSX2P58304 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.53□□□□□ -1.52
VSX2P58304 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.53□□□□□ -1.52
VSX2P58304 AC103703.1-201ENST00000634783 663 ntBASIC5.53□□□□□ -1.52
VSX2P58304 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
VSX2P58304 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.53□□□□□ -1.52
VSX2P58304 AC087565.3-203ENST00000641018 837 ntBASIC5.53□□□□□ -1.52
VSX2P58304 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VSX2P58304 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VSX2P58304 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VSX2P58304 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VSX2P58304 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VSX2P58304 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
VSX2P58304 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VSX2P58304 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
VSX2P58304 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
VSX2P58304 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VSX2P58304 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
VSX2P58304 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VSX2P58304 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.52□□□□□ -1.53
VSX2P58304 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
VSX2P58304 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VSX2P58304 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms