Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
LIM2P55344 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.41□□□□□ -1.54
LIM2P55344 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
LIM2P55344 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.41□□□□□ -1.54
LIM2P55344 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.41□□□□□ -1.54
LIM2P55344 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.41□□□□□ -1.54
LIM2P55344 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
LIM2P55344 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.54
LIM2P55344 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
LIM2P55344 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.4□□□□□ -1.54
LIM2P55344 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LIM2P55344 AC007842.1-201ENST00000597336 2039 ntBASIC5.4□□□□□ -1.54
LIM2P55344 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LIM2P55344 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
LIM2P55344 GTF2IP4-201ENST00000453092 2054 ntBASIC5.4□□□□□ -1.54
LIM2P55344 RNA5SP453-201ENST00000362503 119 ntBASIC5.4□□□□□ -1.54
LIM2P55344 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.4□□□□□ -1.54
LIM2P55344 AC087752.1-201ENST00000391360 558 ntBASIC5.4□□□□□ -1.54
LIM2P55344 EEF1B2P8-201ENST00000414101 671 ntBASIC5.4□□□□□ -1.54
LIM2P55344 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.4□□□□□ -1.54
LIM2P55344 RNGTTP1-201ENST00000420965 728 ntBASIC5.4□□□□□ -1.54
LIM2P55344 BX276092.6-201ENST00000430476 250 ntBASIC5.4□□□□□ -1.54
LIM2P55344 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LIM2P55344 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.4□□□□□ -1.54
LIM2P55344 AC009963.4-201ENST00000448535 339 ntBASIC5.4□□□□□ -1.54
LIM2P55344 BX276092.8-201ENST00000455722 250 ntBASIC5.4□□□□□ -1.54
LIM2P55344 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.4□□□□□ -1.54
LIM2P55344 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LIM2P55344 PSMA2P2-201ENST00000504319 686 ntBASIC5.4□□□□□ -1.54
LIM2P55344 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.4□□□□□ -1.54
LIM2P55344 SNORD46.2-201ENST00000516021 102 ntBASIC5.4□□□□□ -1.54
LIM2P55344 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.4□□□□□ -1.54
LIM2P55344 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.4□□□□□ -1.54
LIM2P55344 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.4□□□□□ -1.54
LIM2P55344 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.4□□□□□ -1.54
LIM2P55344 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.4□□□□□ -1.54
LIM2P55344 HMGB1P42-201ENST00000532126 553 ntBASIC5.4□□□□□ -1.54
LIM2P55344 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.4□□□□□ -1.54
LIM2P55344 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.4□□□□□ -1.54
LIM2P55344 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.4□□□□□ -1.54
LIM2P55344 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
LIM2P55344 DPPA2P4-201ENST00000563717 878 ntBASIC5.4□□□□□ -1.54
LIM2P55344 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.4□□□□□ -1.54
LIM2P55344 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.4□□□□□ -1.54
LIM2P55344 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.4□□□□□ -1.54
LIM2P55344 AP001496.3-201ENST00000580230 913 ntBASIC5.4□□□□□ -1.54
LIM2P55344 AC063977.5-201ENST00000601044 974 ntBASIC5.4□□□□□ -1.54
LIM2P55344 AC015982.1-201ENST00000608113 465 ntBASIC5.4□□□□□ -1.54
LIM2P55344 AC090607.5-201ENST00000615692 224 ntBASIC5.4□□□□□ -1.54
LIM2P55344 AC087565.3-203ENST00000641018 837 ntBASIC5.4□□□□□ -1.54
LIM2P55344 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
LIM2P55344 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.4□□□□□ -1.55
LIM2P55344 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
LIM2P55344 AL161901.1-201ENST00000624954 3425 ntBASIC5.4□□□□□ -1.55
LIM2P55344 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
LIM2P55344 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
LIM2P55344 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.4□□□□□ -1.55
LIM2P55344 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LIM2P55344 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.39□□□□□ -1.55
LIM2P55344 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LIM2P55344 AP002512.4-202ENST00000641599 4530 ntBASIC5.39□□□□□ -1.55
LIM2P55344 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LIM2P55344 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LIM2P55344 AL034546.1-201ENST00000623740 3693 ntBASIC5.39□□□□□ -1.55
LIM2P55344 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LIM2P55344 SNORA64.1-201ENST00000362600 132 ntBASIC5.39□□□□□ -1.55
LIM2P55344 RNA5SP394-201ENST00000364216 119 ntBASIC5.39□□□□□ -1.55
LIM2P55344 RNA5SP510-201ENST00000364697 99 ntBASIC5.39□□□□□ -1.55
LIM2P55344 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.39□□□□□ -1.55
LIM2P55344 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LIM2P55344 HMGB1P20-201ENST00000402555 677 ntBASIC5.39□□□□□ -1.55
LIM2P55344 NME1P1-201ENST00000420914 382 ntBASIC5.39□□□□□ -1.55
LIM2P55344 OR5W1P-201ENST00000423705 938 ntBASIC5.39□□□□□ -1.55
LIM2P55344 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.39□□□□□ -1.55
LIM2P55344 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.39□□□□□ -1.55
LIM2P55344 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.39□□□□□ -1.55
LIM2P55344 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.39□□□□□ -1.55
LIM2P55344 AC099670.2-201ENST00000435130 321 ntBASIC5.39□□□□□ -1.55
LIM2P55344 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.39□□□□□ -1.55
LIM2P55344 AC073109.1-201ENST00000445066 978 ntBASIC5.39□□□□□ -1.55
LIM2P55344 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.39□□□□□ -1.55
LIM2P55344 AC144530.1-201ENST00000452862 555 ntBASIC5.39□□□□□ -1.55
LIM2P55344 AC007998.1-201ENST00000474156 672 ntBASIC5.39□□□□□ -1.55
LIM2P55344 AC117394.1-201ENST00000477323 567 ntBASIC5.39□□□□□ -1.55
LIM2P55344 RPS7P6-201ENST00000485777 579 ntBASIC5.39□□□□□ -1.55
LIM2P55344 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.39□□□□□ -1.55
LIM2P55344 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LIM2P55344 AC093815.1-201ENST00000508637 280 ntBASIC5.39□□□□□ -1.55
LIM2P55344 AC022826.1-201ENST00000519383 805 ntBASIC5.39□□□□□ -1.55
LIM2P55344 OR8Q1P-201ENST00000526467 655 ntBASIC5.39□□□□□ -1.55
LIM2P55344 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.39□□□□□ -1.55
LIM2P55344 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.39□□□□□ -1.55
LIM2P55344 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.39□□□□□ -1.55
LIM2P55344 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.39□□□□□ -1.55
LIM2P55344 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.39□□□□□ -1.55
LIM2P55344 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.39□□□□□ -1.55
LIM2P55344 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.39□□□□□ -1.55
LIM2P55344 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.39□□□□□ -1.55
LIM2P55344 AL031658.2-201ENST00000616850 651 ntBASIC5.39□□□□□ -1.55
LIM2P55344 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms