Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH4P55283 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH4P55283 AC063977.5-201ENST00000601044 974 ntBASIC5.9□□□□□ -1.46
CDH4P55283 NANOGP3-201ENST00000605855 286 ntBASIC5.9□□□□□ -1.46
CDH4P55283 AL133481.2-203ENST00000607558 139 ntBASIC5.9□□□□□ -1.46
CDH4P55283 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.9□□□□□ -1.46
CDH4P55283 AC090607.5-201ENST00000615692 224 ntBASIC5.9□□□□□ -1.46
CDH4P55283 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDH4P55283 SNORA17.5-201ENST00000630429 132 ntBASIC5.9□□□□□ -1.46
CDH4P55283 AC103703.1-201ENST00000634783 663 ntBASIC5.9□□□□□ -1.46
CDH4P55283 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
CDH4P55283 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
CDH4P55283 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.9□□□□□ -1.47
CDH4P55283 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CDH4P55283 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
CDH4P55283 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.9□□□□□ -1.47
CDH4P55283 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
CDH4P55283 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CDH4P55283 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
CDH4P55283 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
CDH4P55283 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CDH4P55283 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH4P55283 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.89□□□□□ -1.47
CDH4P55283 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH4P55283 AL132656.3-201ENST00000606384 1595 ntBASIC5.89□□□□□ -1.47
CDH4P55283 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH4P55283 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.89□□□□□ -1.47
CDH4P55283 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH4P55283 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH4P55283 KARSP1-201ENST00000451871 1752 ntBASIC5.89□□□□□ -1.47
CDH4P55283 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH4P55283 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CDH4P55283 RNA5SP122-201ENST00000384457 108 ntBASIC5.89□□□□□ -1.47
CDH4P55283 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CDH4P55283 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.89□□□□□ -1.47
CDH4P55283 AC117434.1-201ENST00000419971 836 ntBASIC5.89□□□□□ -1.47
CDH4P55283 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH4P55283 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CDH4P55283 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH4P55283 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH4P55283 RPL36AP39-201ENST00000445859 318 ntBASIC5.89□□□□□ -1.47
CDH4P55283 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH4P55283 RPS23P2-201ENST00000463671 415 ntBASIC5.89□□□□□ -1.47
CDH4P55283 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH4P55283 RPS3AP15-201ENST00000483874 781 ntBASIC5.89□□□□□ -1.47
CDH4P55283 AC112191.2-201ENST00000522428 333 ntBASIC5.89□□□□□ -1.47
CDH4P55283 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH4P55283 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH4P55283 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH4P55283 AL513327.3-201ENST00000602618 469 ntBASIC5.89□□□□□ -1.47
CDH4P55283 AL512356.3-201ENST00000623005 461 ntBASIC5.89□□□□□ -1.47
CDH4P55283 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
CDH4P55283 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CDH4P55283 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH4P55283 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH4P55283 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH4P55283 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.89□□□□□ -1.47
CDH4P55283 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH4P55283 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH4P55283 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.89□□□□□ -1.47
CDH4P55283 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH4P55283 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CDH4P55283 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH4P55283 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH4P55283 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.88□□□□□ -1.47
CDH4P55283 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH4P55283 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CDH4P55283 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH4P55283 RNA5SP46-201ENST00000362370 120 ntBASIC5.88□□□□□ -1.47
CDH4P55283 SNORA64.1-201ENST00000362600 132 ntBASIC5.88□□□□□ -1.47
CDH4P55283 RNA5SP435-201ENST00000364044 108 ntBASIC5.88□□□□□ -1.47
CDH4P55283 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH4P55283 RPL11P3-201ENST00000395256 523 ntBASIC5.88□□□□□ -1.47
CDH4P55283 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDH4P55283 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH4P55283 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.88□□□□□ -1.47
CDH4P55283 OR2AT2P-201ENST00000413438 905 ntBASIC5.88□□□□□ -1.47
CDH4P55283 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.88□□□□□ -1.47
CDH4P55283 DPPA2P2-201ENST00000418220 897 ntBASIC5.88□□□□□ -1.47
CDH4P55283 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH4P55283 AC013410.1-201ENST00000436223 1232 ntBASIC5.88□□□□□ -1.47
CDH4P55283 DNAJC19P5-201ENST00000443295 316 ntBASIC5.88□□□□□ -1.47
CDH4P55283 MEMO1P4-201ENST00000453590 386 ntBASIC5.88□□□□□ -1.47
CDH4P55283 SETP20-201ENST00000457046 852 ntBASIC5.88□□□□□ -1.47
CDH4P55283 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.88□□□□□ -1.47
CDH4P55283 RN7SL273P-201ENST00000481561 299 ntBASIC5.88□□□□□ -1.47
CDH4P55283 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDH4P55283 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.88□□□□□ -1.47
CDH4P55283 RN7SKP67-201ENST00000515905 235 ntBASIC5.88□□□□□ -1.47
CDH4P55283 SNORA43.3-201ENST00000517240 103 ntBASIC5.88□□□□□ -1.47
CDH4P55283 TMEM97P2-201ENST00000517841 403 ntBASIC5.88□□□□□ -1.47
CDH4P55283 IGKV3D-34-201ENST00000522638 302 ntBASIC5.88□□□□□ -1.47
CDH4P55283 MRPS16P1-201ENST00000523462 412 ntBASIC5.88□□□□□ -1.47
CDH4P55283 OR4A6P-201ENST00000534364 970 ntBASIC5.88□□□□□ -1.47
CDH4P55283 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH4P55283 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH4P55283 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH4P55283 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH4P55283 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH4P55283 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms