Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PDX1P52945 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDX1P52945 AL359091.1-201ENST00000449048 1734 ntBASIC5.72□□□□□ -1.49
PDX1P52945 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.72□□□□□ -1.49
PDX1P52945 RNA5SP46-201ENST00000362370 120 ntBASIC5.72□□□□□ -1.49
PDX1P52945 RNA5SP394-201ENST00000364216 119 ntBASIC5.72□□□□□ -1.49
PDX1P52945 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDX1P52945 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PDX1P52945 RANP7-201ENST00000418085 644 ntBASIC5.72□□□□□ -1.49
PDX1P52945 RPL34P3-201ENST00000421454 338 ntBASIC5.72□□□□□ -1.49
PDX1P52945 NMD3P2-201ENST00000421815 761 ntBASIC5.72□□□□□ -1.49
PDX1P52945 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.72□□□□□ -1.49
PDX1P52945 AC016027.5-201ENST00000427227 210 ntBASIC5.72□□□□□ -1.49
PDX1P52945 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.72□□□□□ -1.49
PDX1P52945 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.72□□□□□ -1.49
PDX1P52945 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.72□□□□□ -1.49
PDX1P52945 MTCYBP14-201ENST00000457471 715 ntBASIC5.72□□□□□ -1.49
PDX1P52945 AL355032.1-201ENST00000472981 438 ntBASIC5.72□□□□□ -1.49
PDX1P52945 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDX1P52945 NENFP3-201ENST00000503735 313 ntBASIC5.72□□□□□ -1.49
PDX1P52945 AC138866.2-201ENST00000508650 584 ntBASIC5.72□□□□□ -1.49
PDX1P52945 AC074087.1-201ENST00000512059 724 ntBASIC5.72□□□□□ -1.49
PDX1P52945 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDX1P52945 AC130364.2-201ENST00000528639 604 ntBASIC5.72□□□□□ -1.49
PDX1P52945 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.72□□□□□ -1.49
PDX1P52945 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.72□□□□□ -1.49
PDX1P52945 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.72□□□□□ -1.49
PDX1P52945 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.72□□□□□ -1.49
PDX1P52945 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.72□□□□□ -1.49
PDX1P52945 AP003789.1-201ENST00000617737 605 ntBASIC5.72□□□□□ -1.49
PDX1P52945 AC021422.1-201ENST00000621212 473 ntBASIC5.72□□□□□ -1.49
PDX1P52945 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.72□□□□□ -1.49
PDX1P52945 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PDX1P52945 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDX1P52945 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDX1P52945 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.72□□□□□ -1.49
PDX1P52945 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDX1P52945 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PDX1P52945 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PDX1P52945 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PDX1P52945 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.71□□□□□ -1.49
PDX1P52945 Z83820.1-201ENST00000456978 1499 ntBASIC5.71□□□□□ -1.49
PDX1P52945 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PDX1P52945 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
PDX1P52945 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
PDX1P52945 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.71□□□□□ -1.49
PDX1P52945 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
PDX1P52945 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PDX1P52945 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDX1P52945 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.71□□□□□ -1.5
PDX1P52945 CASC19-255ENST00000641733 1385 ntBASIC5.71□□□□□ -1.5
PDX1P52945 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDX1P52945 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDX1P52945 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDX1P52945 OR10R3P-201ENST00000361688 942 ntBASIC5.71□□□□□ -1.5
PDX1P52945 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.71□□□□□ -1.5
PDX1P52945 BMS1P17-202ENST00000416720 316 ntBASIC5.71□□□□□ -1.5
PDX1P52945 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDX1P52945 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.71□□□□□ -1.5
PDX1P52945 AC006455.6-201ENST00000426192 893 ntBASIC5.71□□□□□ -1.5
PDX1P52945 AC126120.1-201ENST00000431082 470 ntBASIC5.71□□□□□ -1.5
PDX1P52945 CLUHP1-201ENST00000435012 1190 ntBASIC5.71□□□□□ -1.5
PDX1P52945 AL445928.1-201ENST00000435545 222 ntBASIC5.71□□□□□ -1.5
PDX1P52945 RPS7P3-201ENST00000443360 580 ntBASIC5.71□□□□□ -1.5
PDX1P52945 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDX1P52945 AL445687.2-201ENST00000458156 728 ntBASIC5.71□□□□□ -1.5
PDX1P52945 AC007688.1-201ENST00000475592 759 ntBASIC5.71□□□□□ -1.5
PDX1P52945 AL035690.1-201ENST00000490892 383 ntBASIC5.71□□□□□ -1.5
PDX1P52945 EIF3LP3-201ENST00000495197 822 ntBASIC5.71□□□□□ -1.5
PDX1P52945 AC008629.2-201ENST00000503783 483 ntBASIC5.71□□□□□ -1.5
PDX1P52945 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.71□□□□□ -1.5
PDX1P52945 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.71□□□□□ -1.5
PDX1P52945 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.71□□□□□ -1.5
PDX1P52945 RN7SKP248-201ENST00000516278 305 ntBASIC5.71□□□□□ -1.5
PDX1P52945 MTND2P7-201ENST00000521337 640 ntBASIC5.71□□□□□ -1.5
PDX1P52945 IGKV2-18-201ENST00000522607 343 ntBASIC5.71□□□□□ -1.5
PDX1P52945 IGLV3-30-201ENST00000524362 298 ntBASIC5.71□□□□□ -1.5
PDX1P52945 AC027026.1-201ENST00000532323 742 ntBASIC5.71□□□□□ -1.5
PDX1P52945 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.71□□□□□ -1.5
PDX1P52945 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.71□□□□□ -1.5
PDX1P52945 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDX1P52945 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.71□□□□□ -1.5
PDX1P52945 AL049840.6-201ENST00000604583 345 ntBASIC5.71□□□□□ -1.5
PDX1P52945 FAM27E4-201ENST00000605259 342 ntBASIC5.71□□□□□ -1.5
PDX1P52945 BNIP3P7-201ENST00000605641 516 ntBASIC5.71□□□□□ -1.5
PDX1P52945 SDR42E1P1-201ENST00000611327 477 ntBASIC5.71□□□□□ -1.5
PDX1P52945 AL445670.1-201ENST00000618889 801 ntBASIC5.71□□□□□ -1.5
PDX1P52945 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDX1P52945 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PDX1P52945 AC027279.4-201ENST00000624371 2072 ntBASIC5.71□□□□□ -1.5
PDX1P52945 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.71□□□□□ -1.5
PDX1P52945 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDX1P52945 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDX1P52945 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
PDX1P52945 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDX1P52945 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDX1P52945 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDX1P52945 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDX1P52945 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDX1P52945 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms