Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 Z92846.1-201ENST00000456203 268 ntBASIC9.82□□□□□ -0.84
SMARCA4P51532 DUBR-205ENST00000495228 411 ntTSL 2 BASIC9.82□□□□□ -0.84
SMARCA4P51532 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SMARCA4P51532 AC134349.2-201ENST00000535136 910 ntBASIC9.82□□□□□ -0.84
SMARCA4P51532 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SMARCA4P51532 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SMARCA4P51532 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SMARCA4P51532 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SMARCA4P51532 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SMARCA4P51532 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC9.81□□□□□ -0.84
SMARCA4P51532 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC9.81□□□□□ -0.84
SMARCA4P51532 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SMARCA4P51532 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC9.81□□□□□ -0.84
SMARCA4P51532 AC126755.2-208ENST00000327792 462 ntBASIC9.81□□□□□ -0.84
SMARCA4P51532 AC138969.1-213ENST00000331436 462 ntBASIC9.81□□□□□ -0.84
SMARCA4P51532 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC9.81□□□□□ -0.84
SMARCA4P51532 RN7SKP253-201ENST00000516424 309 ntBASIC9.81□□□□□ -0.84
SMARCA4P51532 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC9.81□□□□□ -0.84
SMARCA4P51532 AC087283.1-201ENST00000604029 1074 ntBASIC9.81□□□□□ -0.84
SMARCA4P51532 AC091905.4-201ENST00000623432 202 ntBASIC9.81□□□□□ -0.84
SMARCA4P51532 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC9.81□□□□□ -0.84
SMARCA4P51532 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SMARCA4P51532 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SMARCA4P51532 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SMARCA4P51532 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SMARCA4P51532 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SMARCA4P51532 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC9.8□□□□□ -0.84
SMARCA4P51532 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
SMARCA4P51532 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SMARCA4P51532 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SMARCA4P51532 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC9.8□□□□□ -0.84
SMARCA4P51532 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC9.8□□□□□ -0.84
SMARCA4P51532 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
SMARCA4P51532 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SMARCA4P51532 COX6B1P1-201ENST00000415962 213 ntBASIC9.8□□□□□ -0.84
SMARCA4P51532 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
SMARCA4P51532 AP000769.2-201ENST00000602344 396 ntBASIC9.8□□□□□ -0.84
SMARCA4P51532 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
SMARCA4P51532 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SMARCA4P51532 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
SMARCA4P51532 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SMARCA4P51532 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SMARCA4P51532 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMARCA4P51532 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
SMARCA4P51532 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMARCA4P51532 AL138878.2-201ENST00000440581 1241 ntBASIC9.79□□□□□ -0.84
SMARCA4P51532 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC9.79□□□□□ -0.84
SMARCA4P51532 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC9.79□□□□□ -0.84
SMARCA4P51532 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC9.79□□□□□ -0.84
SMARCA4P51532 AP005403.1-201ENST00000579720 229 ntBASIC9.79□□□□□ -0.84
SMARCA4P51532 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC9.79□□□□□ -0.84
SMARCA4P51532 AC005084.1-201ENST00000605160 304 ntBASIC9.79□□□□□ -0.84
SMARCA4P51532 HIRAP1-201ENST00000605318 787 ntBASIC9.79□□□□□ -0.84
SMARCA4P51532 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMARCA4P51532 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMARCA4P51532 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMARCA4P51532 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMARCA4P51532 AL008638.3-201ENST00000623027 5182 ntBASIC9.79□□□□□ -0.84
SMARCA4P51532 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMARCA4P51532 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMARCA4P51532 AC012618.3-205ENST00000637896 1496 ntBASIC9.79□□□□□ -0.84
SMARCA4P51532 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SMARCA4P51532 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC9.78□□□□□ -0.84
SMARCA4P51532 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC9.78□□□□□ -0.84
SMARCA4P51532 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
SMARCA4P51532 TMEM183AP1-205ENST00000432739 290 ntBASIC9.78□□□□□ -0.84
SMARCA4P51532 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC9.78□□□□□ -0.84
SMARCA4P51532 MEMO1P4-201ENST00000453590 386 ntBASIC9.78□□□□□ -0.84
SMARCA4P51532 AC093267.1-201ENST00000489176 961 ntBASIC9.78□□□□□ -0.84
SMARCA4P51532 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SMARCA4P51532 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
SMARCA4P51532 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC9.78□□□□□ -0.84
SMARCA4P51532 SCARNA16.4-201ENST00000516956 187 ntBASIC9.78□□□□□ -0.84
SMARCA4P51532 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC9.78□□□□□ -0.84
SMARCA4P51532 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMARCA4P51532 AP000346.3-201ENST00000622821 210 ntBASIC9.78□□□□□ -0.84
SMARCA4P51532 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC9.78□□□□□ -0.84
SMARCA4P51532 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMARCA4P51532 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC9.78□□□□□ -0.84
SMARCA4P51532 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SMARCA4P51532 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMARCA4P51532 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
SMARCA4P51532 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMARCA4P51532 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMARCA4P51532 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SMARCA4P51532 AL121886.1-201ENST00000358609 435 ntBASIC9.78□□□□□ -0.84
SMARCA4P51532 RN7SKP149-201ENST00000363008 344 ntBASIC9.78□□□□□ -0.84
SMARCA4P51532 AL078599.1-201ENST00000402075 293 ntBASIC9.78□□□□□ -0.84
SMARCA4P51532 USP9YP9-201ENST00000429406 715 ntBASIC9.78□□□□□ -0.84
SMARCA4P51532 FABP5P2-201ENST00000439042 408 ntBASIC9.78□□□□□ -0.84
SMARCA4P51532 AC024451.1-201ENST00000508013 779 ntBASIC9.78□□□□□ -0.84
SMARCA4P51532 AC078899.1-201ENST00000521432 1185 ntBASIC9.78□□□□□ -0.84
SMARCA4P51532 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC9.78□□□□□ -0.84
SMARCA4P51532 AC068790.4-201ENST00000602474 263 ntBASIC9.78□□□□□ -0.84
SMARCA4P51532 CYCSP1-201ENST00000604815 315 ntBASIC9.78□□□□□ -0.84
SMARCA4P51532 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC9.78□□□□□ -0.84
SMARCA4P51532 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
SMARCA4P51532 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
SMARCA4P51532 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SMARCA4P51532 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms