Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.71□□□□□ -1.33
SCN4AP35499 RN7SL352P-201ENST00000466002 277 ntBASIC6.71□□□□□ -1.33
SCN4AP35499 RPL5P22-201ENST00000480199 884 ntBASIC6.71□□□□□ -1.33
SCN4AP35499 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.71□□□□□ -1.33
SCN4AP35499 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.71□□□□□ -1.33
SCN4AP35499 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.33
SCN4AP35499 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.71□□□□□ -1.33
SCN4AP35499 AL355974.3-201ENST00000617383 467 ntBASIC6.71□□□□□ -1.33
SCN4AP35499 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
SCN4AP35499 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SCN4AP35499 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.71□□□□□ -1.33
SCN4AP35499 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
SCN4AP35499 AC002090.1-201ENST00000625000 2138 ntBASIC6.71□□□□□ -1.34
SCN4AP35499 MFSD8-219ENST00000641228 2559 ntBASIC6.71□□□□□ -1.34
SCN4AP35499 AC232271.1-201ENST00000602455 2715 ntBASIC6.71□□□□□ -1.34
SCN4AP35499 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
SCN4AP35499 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SCN4AP35499 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SCN4AP35499 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.71□□□□□ -1.34
SCN4AP35499 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SCN4AP35499 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SCN4AP35499 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.71□□□□□ -1.34
SCN4AP35499 AC068769.1-201ENST00000474767 2426 ntBASIC6.71□□□□□ -1.34
SCN4AP35499 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.71□□□□□ -1.34
SCN4AP35499 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.71□□□□□ -1.34
SCN4AP35499 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.71□□□□□ -1.34
SCN4AP35499 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.71□□□□□ -1.34
SCN4AP35499 AC016712.1-201ENST00000431088 378 ntBASIC6.71□□□□□ -1.34
SCN4AP35499 AL049745.1-201ENST00000433953 286 ntBASIC6.71□□□□□ -1.34
SCN4AP35499 AC096775.1-201ENST00000437724 448 ntBASIC6.71□□□□□ -1.34
SCN4AP35499 AC105384.2-201ENST00000508433 640 ntBASIC6.71□□□□□ -1.34
SCN4AP35499 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.71□□□□□ -1.34
SCN4AP35499 AC091905.4-201ENST00000623432 202 ntBASIC6.71□□□□□ -1.34
SCN4AP35499 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SCN4AP35499 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
SCN4AP35499 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SCN4AP35499 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SCN4AP35499 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
SCN4AP35499 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SCN4AP35499 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.7□□□□□ -1.34
SCN4AP35499 MAPK10-338ENST00000641647 3362 ntBASIC6.7□□□□□ -1.34
SCN4AP35499 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SCN4AP35499 AC016251.2-201ENST00000623393 3089 ntBASIC6.7□□□□□ -1.34
SCN4AP35499 MIR551A-201ENST00000385042 96 ntBASIC6.7□□□□□ -1.34
SCN4AP35499 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
SCN4AP35499 AP003170.5-201ENST00000397185 335 ntBASIC6.7□□□□□ -1.34
SCN4AP35499 RNU4-64P-201ENST00000410795 131 ntBASIC6.7□□□□□ -1.34
SCN4AP35499 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.7□□□□□ -1.34
SCN4AP35499 AL138878.2-201ENST00000440581 1241 ntBASIC6.7□□□□□ -1.34
SCN4AP35499 AC002075.1-201ENST00000457396 676 ntBASIC6.7□□□□□ -1.34
SCN4AP35499 RN7SL205P-201ENST00000490174 284 ntBASIC6.7□□□□□ -1.34
SCN4AP35499 RPL37AP8-201ENST00000494116 276 ntBASIC6.7□□□□□ -1.34
SCN4AP35499 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.7□□□□□ -1.34
SCN4AP35499 SUMO2P19-201ENST00000518920 295 ntBASIC6.7□□□□□ -1.34
SCN4AP35499 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.7□□□□□ -1.34
SCN4AP35499 MRPS21P9-201ENST00000571150 257 ntBASIC6.7□□□□□ -1.34
SCN4AP35499 RN7SL52P-201ENST00000584271 284 ntBASIC6.7□□□□□ -1.34
SCN4AP35499 RN7SL722P-201ENST00000617780 284 ntBASIC6.7□□□□□ -1.34
SCN4AP35499 RN7SL565P-201ENST00000618246 284 ntBASIC6.7□□□□□ -1.34
SCN4AP35499 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SCN4AP35499 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
SCN4AP35499 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
SCN4AP35499 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SCN4AP35499 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SCN4AP35499 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SCN4AP35499 AC130304.1-201ENST00000622942 2385 ntBASIC6.69□□□□□ -1.34
SCN4AP35499 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SCN4AP35499 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
SCN4AP35499 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.69□□□□□ -1.34
SCN4AP35499 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCN4AP35499 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCN4AP35499 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.69□□□□□ -1.34
SCN4AP35499 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SCN4AP35499 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SCN4AP35499 AL133482.1-201ENST00000415988 498 ntBASIC6.69□□□□□ -1.34
SCN4AP35499 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.69□□□□□ -1.34
SCN4AP35499 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.69□□□□□ -1.34
SCN4AP35499 CYP4F27P-201ENST00000514557 494 ntBASIC6.69□□□□□ -1.34
SCN4AP35499 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.69□□□□□ -1.34
SCN4AP35499 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.69□□□□□ -1.34
SCN4AP35499 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.69□□□□□ -1.34
SCN4AP35499 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.69□□□□□ -1.34
SCN4AP35499 MIR7703-201ENST00000620784 77 ntBASIC6.69□□□□□ -1.34
SCN4AP35499 AP003175.1-201ENST00000641383 6658 ntBASIC6.69□□□□□ -1.34
SCN4AP35499 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
SCN4AP35499 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCN4AP35499 AC110716.2-201ENST00000563865 3945 ntBASIC6.69□□□□□ -1.34
SCN4AP35499 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCN4AP35499 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
SCN4AP35499 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.69□□□□□ -1.34
SCN4AP35499 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SCN4AP35499 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCN4AP35499 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCN4AP35499 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.69□□□□□ -1.34
SCN4AP35499 SNORA17.1-201ENST00000362945 126 ntBASIC6.69□□□□□ -1.34
SCN4AP35499 AC211486.3-201ENST00000412694 621 ntBASIC6.69□□□□□ -1.34
SCN4AP35499 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.69□□□□□ -1.34
SCN4AP35499 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.69□□□□□ -1.34
SCN4AP35499 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.69□□□□□ -1.34
SCN4AP35499 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms