Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.74□□□□□ -1.49
RPA3P35244 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RPA3P35244 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RPA3P35244 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RPA3P35244 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RPA3P35244 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RPA3P35244 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RPA3P35244 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RPA3P35244 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RPA3P35244 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
RPA3P35244 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.74□□□□□ -1.49
RPA3P35244 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
RPA3P35244 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RPA3P35244 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
RPA3P35244 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.73□□□□□ -1.49
RPA3P35244 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RPA3P35244 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RPA3P35244 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RPA3P35244 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RPA3P35244 RNA5SP326-201ENST00000363209 110 ntBASIC5.73□□□□□ -1.49
RPA3P35244 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.73□□□□□ -1.49
RPA3P35244 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.73□□□□□ -1.49
RPA3P35244 AC016739.1-201ENST00000405359 345 ntBASIC5.73□□□□□ -1.49
RPA3P35244 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.73□□□□□ -1.49
RPA3P35244 RN7SKP240-201ENST00000410583 375 ntBASIC5.73□□□□□ -1.49
RPA3P35244 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.73□□□□□ -1.49
RPA3P35244 KIF4CP-201ENST00000422742 1279 ntBASIC5.73□□□□□ -1.49
RPA3P35244 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.73□□□□□ -1.49
RPA3P35244 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.73□□□□□ -1.49
RPA3P35244 LINC02210-201ENST00000444561 288 ntBASIC5.73□□□□□ -1.49
RPA3P35244 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
RPA3P35244 GEMIN2P1-201ENST00000454246 752 ntBASIC5.73□□□□□ -1.49
RPA3P35244 ACA64.1-201ENST00000459171 127 ntBASIC5.73□□□□□ -1.49
RPA3P35244 SNORD125-201ENST00000459538 96 ntBASIC5.73□□□□□ -1.49
RPA3P35244 ABCC13-202ENST00000463099 3842 ntBASIC5.73□□□□□ -1.49
RPA3P35244 OR5H7P-201ENST00000514084 930 ntBASIC5.73□□□□□ -1.49
RPA3P35244 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.73□□□□□ -1.49
RPA3P35244 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.73□□□□□ -1.49
RPA3P35244 SEPT10P1-201ENST00000517342 1162 ntBASIC5.73□□□□□ -1.49
RPA3P35244 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.73□□□□□ -1.49
RPA3P35244 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.73□□□□□ -1.49
RPA3P35244 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.73□□□□□ -1.49
RPA3P35244 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.73□□□□□ -1.49
RPA3P35244 AC139697.1-201ENST00000548429 745 ntBASIC5.73□□□□□ -1.49
RPA3P35244 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.73□□□□□ -1.49
RPA3P35244 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.73□□□□□ -1.49
RPA3P35244 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.73□□□□□ -1.49
RPA3P35244 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.73□□□□□ -1.49
RPA3P35244 DHFRP1-201ENST00000579682 559 ntBASIC5.73□□□□□ -1.49
RPA3P35244 AL138895.2-201ENST00000603019 178 ntBASIC5.73□□□□□ -1.49
RPA3P35244 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.73□□□□□ -1.49
RPA3P35244 MIR6809-201ENST00000612189 116 ntBASIC5.73□□□□□ -1.49
RPA3P35244 AL139099.4-201ENST00000614802 114 ntBASIC5.73□□□□□ -1.49
RPA3P35244 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.73□□□□□ -1.49
RPA3P35244 AC024884.1-201ENST00000620583 399 ntBASIC5.73□□□□□ -1.49
RPA3P35244 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RPA3P35244 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.73□□□□□ -1.49
RPA3P35244 AC002525.1-201ENST00000624392 1622 ntBASIC5.73□□□□□ -1.49
RPA3P35244 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.73□□□□□ -1.49
RPA3P35244 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
RPA3P35244 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RPA3P35244 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RPA3P35244 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.73□□□□□ -1.49
RPA3P35244 AC117409.1-201ENST00000470499 1310 ntBASIC5.73□□□□□ -1.49
RPA3P35244 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.72□□□□□ -1.49
RPA3P35244 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RPA3P35244 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RPA3P35244 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.72□□□□□ -1.49
RPA3P35244 AC027088.4-201ENST00000611559 1947 ntBASIC5.72□□□□□ -1.49
RPA3P35244 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RPA3P35244 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RPA3P35244 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RPA3P35244 RN7SKP275-201ENST00000364626 301 ntBASIC5.72□□□□□ -1.49
RPA3P35244 SUGT1P2-201ENST00000379452 992 ntBASIC5.72□□□□□ -1.49
RPA3P35244 RNA5SP187-201ENST00000384400 119 ntBASIC5.72□□□□□ -1.49
RPA3P35244 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RPA3P35244 U3.28-201ENST00000391249 210 ntBASIC5.72□□□□□ -1.49
RPA3P35244 AL096711.1-201ENST00000404780 554 ntBASIC5.72□□□□□ -1.49
RPA3P35244 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.72□□□□□ -1.49
RPA3P35244 AL122020.1-201ENST00000472287 459 ntBASIC5.72□□□□□ -1.49
RPA3P35244 AC099521.1-201ENST00000482557 334 ntBASIC5.72□□□□□ -1.49
RPA3P35244 RN7SL193P-201ENST00000491708 276 ntBASIC5.72□□□□□ -1.49
RPA3P35244 DUTP1-201ENST00000493631 470 ntBASIC5.72□□□□□ -1.49
RPA3P35244 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.72□□□□□ -1.49
RPA3P35244 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.72□□□□□ -1.49
RPA3P35244 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.72□□□□□ -1.49
RPA3P35244 OR4A17P-201ENST00000526032 904 ntBASIC5.72□□□□□ -1.49
RPA3P35244 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.72□□□□□ -1.49
RPA3P35244 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.72□□□□□ -1.49
RPA3P35244 LINC00556-201ENST00000569603 412 ntBASIC5.72□□□□□ -1.49
RPA3P35244 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.72□□□□□ -1.49
RPA3P35244 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.72□□□□□ -1.49
RPA3P35244 OR7A8P-201ENST00000595427 913 ntBASIC5.72□□□□□ -1.49
RPA3P35244 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.72□□□□□ -1.49
RPA3P35244 AC067773.1-201ENST00000603284 1094 ntBASIC5.72□□□□□ -1.49
RPA3P35244 AC010632.3-201ENST00000611377 369 ntBASIC5.72□□□□□ -1.49
RPA3P35244 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.72□□□□□ -1.49
RPA3P35244 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.72□□□□□ -1.49
RPA3P35244 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RPA3P35244 AC068870.1-201ENST00000563737 2455 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms