Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
CLIP1P30622 AL034546.1-201ENST00000623740 3693 ntBASIC8.92□□□□□ -0.98
CLIP1P30622 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
CLIP1P30622 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CLIP1P30622 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
CLIP1P30622 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC8.91□□□□□ -0.98
CLIP1P30622 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC8.91□□□□□ -0.98
CLIP1P30622 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
CLIP1P30622 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
CLIP1P30622 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CLIP1P30622 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
CLIP1P30622 RNU1-136P-201ENST00000384181 164 ntBASIC8.91□□□□□ -0.98
CLIP1P30622 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC8.91□□□□□ -0.98
CLIP1P30622 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC8.91□□□□□ -0.98
CLIP1P30622 AC007161.1-204ENST00000423039 460 ntBASIC8.91□□□□□ -0.98
CLIP1P30622 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC8.91□□□□□ -0.98
CLIP1P30622 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC8.91□□□□□ -0.98
CLIP1P30622 PDCL3P4-201ENST00000489621 720 ntBASIC8.91□□□□□ -0.98
CLIP1P30622 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC8.91□□□□□ -0.98
CLIP1P30622 AC231760.1-201ENST00000498002 260 ntBASIC8.91□□□□□ -0.98
CLIP1P30622 AC090638.1-201ENST00000498296 909 ntBASIC8.91□□□□□ -0.98
CLIP1P30622 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC8.91□□□□□ -0.98
CLIP1P30622 RNA5SP92-201ENST00000516437 110 ntBASIC8.91□□□□□ -0.98
CLIP1P30622 ASB8-215ENST00000540782 659 ntTSL 3 BASIC8.91□□□□□ -0.98
CLIP1P30622 HAUS8P1-201ENST00000549005 542 ntBASIC8.91□□□□□ -0.98
CLIP1P30622 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC8.91□□□□□ -0.98
CLIP1P30622 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
CLIP1P30622 AC000068.2-201ENST00000608816 460 ntBASIC8.91□□□□□ -0.98
CLIP1P30622 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC8.91□□□□□ -0.98
CLIP1P30622 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC8.91□□□□□ -0.98
CLIP1P30622 AC037198.3-201ENST00000616754 526 ntBASIC8.91□□□□□ -0.98
CLIP1P30622 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CLIP1P30622 AC132068.1-201ENST00000623805 459 ntBASIC8.91□□□□□ -0.98
CLIP1P30622 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC8.91□□□□□ -0.98
CLIP1P30622 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
CLIP1P30622 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC8.91□□□□□ -0.98
CLIP1P30622 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
CLIP1P30622 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
CLIP1P30622 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CLIP1P30622 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
CLIP1P30622 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CLIP1P30622 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC8.9□□□□□ -0.98
CLIP1P30622 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CLIP1P30622 MIR133B-201ENST00000362210 119 ntBASIC8.9□□□□□ -0.98
CLIP1P30622 SSX3-202ENST00000376893 800 ntTSL 2 BASIC8.9□□□□□ -0.98
CLIP1P30622 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CLIP1P30622 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
CLIP1P30622 AC009804.1-201ENST00000400949 179 ntBASIC8.9□□□□□ -0.98
CLIP1P30622 RPL35AP24-201ENST00000413846 330 ntBASIC8.9□□□□□ -0.98
CLIP1P30622 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC8.9□□□□□ -0.98
CLIP1P30622 AC004815.1-201ENST00000484185 331 ntBASIC8.9□□□□□ -0.98
CLIP1P30622 RN7SL30P-201ENST00000488416 306 ntBASIC8.9□□□□□ -0.98
CLIP1P30622 AC253576.1-201ENST00000511645 1156 ntBASIC8.9□□□□□ -0.98
CLIP1P30622 AC137627.1-201ENST00000545761 289 ntBASIC8.9□□□□□ -0.98
CLIP1P30622 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC8.9□□□□□ -0.98
CLIP1P30622 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC8.9□□□□□ -0.98
CLIP1P30622 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
CLIP1P30622 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CLIP1P30622 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CLIP1P30622 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
CLIP1P30622 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
CLIP1P30622 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
CLIP1P30622 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
CLIP1P30622 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
CLIP1P30622 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC8.9□□□□□ -0.99
CLIP1P30622 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC8.89□□□□□ -0.99
CLIP1P30622 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CLIP1P30622 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CLIP1P30622 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
CLIP1P30622 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC8.89□□□□□ -0.99
CLIP1P30622 AC096921.1-201ENST00000411661 375 ntBASIC8.89□□□□□ -0.99
CLIP1P30622 RPSAP35-201ENST00000413753 818 ntBASIC8.89□□□□□ -0.99
CLIP1P30622 RNGTTP1-201ENST00000420965 728 ntBASIC8.89□□□□□ -0.99
CLIP1P30622 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC8.89□□□□□ -0.99
CLIP1P30622 CYCSP12-201ENST00000437729 300 ntBASIC8.89□□□□□ -0.99
CLIP1P30622 BX679664.2-201ENST00000439282 283 ntBASIC8.89□□□□□ -0.99
CLIP1P30622 NANOGP9-201ENST00000439890 892 ntBASIC8.89□□□□□ -0.99
CLIP1P30622 RPEP1-201ENST00000504507 658 ntBASIC8.89□□□□□ -0.99
CLIP1P30622 OR5M14P-201ENST00000506803 618 ntBASIC8.89□□□□□ -0.99
CLIP1P30622 ST13P12-201ENST00000508958 1094 ntBASIC8.89□□□□□ -0.99
CLIP1P30622 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC8.89□□□□□ -0.99
CLIP1P30622 RN7SKP253-201ENST00000516424 309 ntBASIC8.89□□□□□ -0.99
CLIP1P30622 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC8.89□□□□□ -0.99
CLIP1P30622 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC8.89□□□□□ -0.99
CLIP1P30622 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC8.89□□□□□ -0.99
CLIP1P30622 AP003789.1-201ENST00000617737 605 ntBASIC8.89□□□□□ -0.99
CLIP1P30622 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
CLIP1P30622 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
CLIP1P30622 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
CLIP1P30622 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
CLIP1P30622 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
CLIP1P30622 AC140479.2-201ENST00000421567 3130 ntBASIC8.89□□□□□ -0.99
CLIP1P30622 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CLIP1P30622 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
CLIP1P30622 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
CLIP1P30622 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC8.89□□□□□ -0.99
CLIP1P30622 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
CLIP1P30622 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
CLIP1P30622 HSPD1P7-201ENST00000447985 1686 ntBASIC8.89□□□□□ -0.99
CLIP1P30622 EEF1A1P33-201ENST00000554413 1362 ntBASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 334.1 ms