Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AL591379.1-207ENST00000635982 261 ntBASIC5.29□□□□□ -1.56
SHC1P29353 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.29□□□□□ -1.56
SHC1P29353 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.29□□□□□ -1.56
SHC1P29353 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHC1P29353 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SHC1P29353 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SHC1P29353 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHC1P29353 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.29□□□□□ -1.56
SHC1P29353 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHC1P29353 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHC1P29353 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHC1P29353 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHC1P29353 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.29□□□□□ -1.56
SHC1P29353 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
SHC1P29353 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHC1P29353 AC011933.2-201ENST00000578539 2790 ntBASIC5.28□□□□□ -1.56
SHC1P29353 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHC1P29353 MFSD8-219ENST00000641228 2559 ntBASIC5.28□□□□□ -1.56
SHC1P29353 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHC1P29353 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHC1P29353 AC006600.2-201ENST00000624834 2506 ntBASIC5.28□□□□□ -1.56
SHC1P29353 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.28□□□□□ -1.56
SHC1P29353 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHC1P29353 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHC1P29353 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHC1P29353 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHC1P29353 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHC1P29353 RN7SKP186-201ENST00000365371 303 ntBASIC5.28□□□□□ -1.56
SHC1P29353 MRPL53P1-201ENST00000414323 319 ntBASIC5.28□□□□□ -1.56
SHC1P29353 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.28□□□□□ -1.56
SHC1P29353 RPS3P2-201ENST00000421346 701 ntBASIC5.28□□□□□ -1.56
SHC1P29353 GAPDHP34-201ENST00000432112 823 ntBASIC5.28□□□□□ -1.56
SHC1P29353 TUBB4BP6-201ENST00000437576 479 ntBASIC5.28□□□□□ -1.56
SHC1P29353 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.28□□□□□ -1.56
SHC1P29353 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.28□□□□□ -1.56
SHC1P29353 AC004129.2-201ENST00000457229 287 ntBASIC5.28□□□□□ -1.56
SHC1P29353 ACA64.1-201ENST00000459171 127 ntBASIC5.28□□□□□ -1.56
SHC1P29353 AC094085.1-201ENST00000468914 584 ntBASIC5.28□□□□□ -1.56
SHC1P29353 RPL12P24-201ENST00000474907 486 ntBASIC5.28□□□□□ -1.56
SHC1P29353 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.28□□□□□ -1.56
SHC1P29353 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.28□□□□□ -1.56
SHC1P29353 AC111000.6-201ENST00000514471 709 ntBASIC5.28□□□□□ -1.56
SHC1P29353 IGKV2-4-201ENST00000523070 340 ntBASIC5.28□□□□□ -1.56
SHC1P29353 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.28□□□□□ -1.56
SHC1P29353 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.28□□□□□ -1.56
SHC1P29353 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.28□□□□□ -1.56
SHC1P29353 AC105036.1-201ENST00000566222 271 ntBASIC5.28□□□□□ -1.56
SHC1P29353 NDUFA5P11-201ENST00000567995 343 ntBASIC5.28□□□□□ -1.56
SHC1P29353 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.28□□□□□ -1.56
SHC1P29353 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.28□□□□□ -1.56
SHC1P29353 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.28□□□□□ -1.56
SHC1P29353 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.28□□□□□ -1.56
SHC1P29353 AC145423.1-201ENST00000605712 336 ntBASIC5.28□□□□□ -1.56
SHC1P29353 AC022400.9-201ENST00000623633 273 ntBASIC5.28□□□□□ -1.56
SHC1P29353 AC103798.2-201ENST00000624292 632 ntBASIC5.28□□□□□ -1.56
SHC1P29353 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.28□□□□□ -1.56
SHC1P29353 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.28□□□□□ -1.56
SHC1P29353 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.28□□□□□ -1.56
SHC1P29353 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHC1P29353 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
SHC1P29353 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHC1P29353 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHC1P29353 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHC1P29353 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SHC1P29353 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.28□□□□□ -1.56
SHC1P29353 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHC1P29353 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHC1P29353 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHC1P29353 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHC1P29353 AC140479.2-201ENST00000421567 3130 ntBASIC5.28□□□□□ -1.56
SHC1P29353 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.28□□□□□ -1.56
SHC1P29353 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
SHC1P29353 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SHC1P29353 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHC1P29353 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHC1P29353 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SHC1P29353 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHC1P29353 ADAM24P-201ENST00000398655 2101 ntBASIC5.27□□□□□ -1.57
SHC1P29353 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SHC1P29353 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
SHC1P29353 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHC1P29353 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.27□□□□□ -1.57
SHC1P29353 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SHC1P29353 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHC1P29353 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHC1P29353 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SHC1P29353 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHC1P29353 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHC1P29353 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHC1P29353 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.27□□□□□ -1.57
SHC1P29353 HMGN1P20-201ENST00000411849 300 ntBASIC5.27□□□□□ -1.57
SHC1P29353 AC009506.2-201ENST00000420635 840 ntBASIC5.27□□□□□ -1.57
SHC1P29353 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.27□□□□□ -1.57
SHC1P29353 AC126120.1-201ENST00000431082 470 ntBASIC5.27□□□□□ -1.57
SHC1P29353 OR6C71P-201ENST00000432580 913 ntBASIC5.27□□□□□ -1.57
SHC1P29353 AC099670.2-201ENST00000435130 321 ntBASIC5.27□□□□□ -1.57
SHC1P29353 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHC1P29353 AC073072.2-201ENST00000447425 348 ntBASIC5.27□□□□□ -1.57
SHC1P29353 RPL12P39-201ENST00000455456 496 ntBASIC5.27□□□□□ -1.57
SHC1P29353 AC108751.3-201ENST00000461814 1020 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 2032.7 ms