Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC109583.2-201ENST00000617367 129 ntBASIC6.73□□□□□ -1.33
POLR2AP24928 AC090772.4-201ENST00000623599 362 ntBASIC6.73□□□□□ -1.33
POLR2AP24928 AL109659.3-201ENST00000624985 950 ntBASIC6.73□□□□□ -1.33
POLR2AP24928 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.73□□□□□ -1.33
POLR2AP24928 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.73□□□□□ -1.33
POLR2AP24928 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
POLR2AP24928 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
POLR2AP24928 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.73□□□□□ -1.33
POLR2AP24928 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
POLR2AP24928 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
POLR2AP24928 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
POLR2AP24928 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
POLR2AP24928 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
POLR2AP24928 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
POLR2AP24928 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
POLR2AP24928 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
POLR2AP24928 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
POLR2AP24928 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
POLR2AP24928 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
POLR2AP24928 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.73□□□□□ -1.33
POLR2AP24928 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
POLR2AP24928 RNU6-925P-201ENST00000384629 104 ntBASIC6.73□□□□□ -1.33
POLR2AP24928 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
POLR2AP24928 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.73□□□□□ -1.33
POLR2AP24928 SLC25A14P1-201ENST00000502867 901 ntBASIC6.73□□□□□ -1.33
POLR2AP24928 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC6.73□□□□□ -1.33
POLR2AP24928 AL671862.1-201ENST00000515851 349 ntBASIC6.73□□□□□ -1.33
POLR2AP24928 AP003102.1-201ENST00000525638 661 ntBASIC6.73□□□□□ -1.33
POLR2AP24928 OR5AZ1P-201ENST00000527448 943 ntBASIC6.73□□□□□ -1.33
POLR2AP24928 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
POLR2AP24928 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.73□□□□□ -1.33
POLR2AP24928 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC6.73□□□□□ -1.33
POLR2AP24928 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC6.73□□□□□ -1.33
POLR2AP24928 MIR8089-201ENST00000620165 82 ntBASIC6.73□□□□□ -1.33
POLR2AP24928 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.73□□□□□ -1.33
POLR2AP24928 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
POLR2AP24928 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
POLR2AP24928 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.73□□□□□ -1.33
POLR2AP24928 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC6.73□□□□□ -1.33
POLR2AP24928 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
POLR2AP24928 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.72□□□□□ -1.33
POLR2AP24928 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
POLR2AP24928 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
POLR2AP24928 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.72□□□□□ -1.33
POLR2AP24928 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
POLR2AP24928 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
POLR2AP24928 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
POLR2AP24928 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
POLR2AP24928 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
POLR2AP24928 RN7SKP104-201ENST00000362605 328 ntBASIC6.72□□□□□ -1.33
POLR2AP24928 RNA5SP339-201ENST00000390987 122 ntBASIC6.72□□□□□ -1.33
POLR2AP24928 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.72□□□□□ -1.33
POLR2AP24928 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.72□□□□□ -1.33
POLR2AP24928 RNF2P1-201ENST00000442955 1010 ntBASIC6.72□□□□□ -1.33
POLR2AP24928 RPS18P6-201ENST00000476880 458 ntBASIC6.72□□□□□ -1.33
POLR2AP24928 RPL37AP8-201ENST00000494116 276 ntBASIC6.72□□□□□ -1.33
POLR2AP24928 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
POLR2AP24928 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.72□□□□□ -1.33
POLR2AP24928 AC137768.1-201ENST00000549998 553 ntBASIC6.72□□□□□ -1.33
POLR2AP24928 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC6.72□□□□□ -1.33
POLR2AP24928 AC015720.2-201ENST00000567709 334 ntBASIC6.72□□□□□ -1.33
POLR2AP24928 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.72□□□□□ -1.33
POLR2AP24928 BNIP3P27-201ENST00000599991 412 ntBASIC6.72□□□□□ -1.33
POLR2AP24928 AC104785.1-201ENST00000603220 588 ntBASIC6.72□□□□□ -1.33
POLR2AP24928 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
POLR2AP24928 AC104763.3-201ENST00000613765 618 ntBASIC6.72□□□□□ -1.33
POLR2AP24928 AC006249.1-201ENST00000621223 471 ntBASIC6.72□□□□□ -1.33
POLR2AP24928 SAMMSON-209ENST00000641222 1100 ntBASIC6.72□□□□□ -1.33
POLR2AP24928 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
POLR2AP24928 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
POLR2AP24928 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
POLR2AP24928 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
POLR2AP24928 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.72□□□□□ -1.33
POLR2AP24928 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
POLR2AP24928 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
POLR2AP24928 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
POLR2AP24928 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.72□□□□□ -1.33
POLR2AP24928 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
POLR2AP24928 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
POLR2AP24928 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
POLR2AP24928 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
POLR2AP24928 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
POLR2AP24928 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
POLR2AP24928 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
POLR2AP24928 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC6.72□□□□□ -1.33
POLR2AP24928 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.71□□□□□ -1.33
POLR2AP24928 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
POLR2AP24928 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
POLR2AP24928 AL035419.1-201ENST00000397037 564 ntBASIC6.71□□□□□ -1.33
POLR2AP24928 ATP5F1P6-201ENST00000402768 767 ntBASIC6.71□□□□□ -1.33
POLR2AP24928 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC6.71□□□□□ -1.33
POLR2AP24928 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.71□□□□□ -1.33
POLR2AP24928 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
POLR2AP24928 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.71□□□□□ -1.33
POLR2AP24928 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.71□□□□□ -1.33
POLR2AP24928 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.71□□□□□ -1.33
POLR2AP24928 OR51A1P-201ENST00000511110 946 ntBASIC6.71□□□□□ -1.33
POLR2AP24928 AC010374.2-201ENST00000512933 535 ntBASIC6.71□□□□□ -1.33
POLR2AP24928 OR4A42P-201ENST00000531397 938 ntBASIC6.71□□□□□ -1.33
POLR2AP24928 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.71□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms