Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 HMGB3P10-201ENST00000434734 572 ntBASIC7.98□□□□□ -1.13
RFX1P22670 NDUFS5P5-201ENST00000437256 321 ntBASIC7.98□□□□□ -1.13
RFX1P22670 RPL29P7-201ENST00000440227 457 ntBASIC7.98□□□□□ -1.13
RFX1P22670 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC7.98□□□□□ -1.13
RFX1P22670 DDX39BP2-208ENST00000453923 258 ntBASIC7.98□□□□□ -1.13
RFX1P22670 BX248409.1-201ENST00000455497 255 ntBASIC7.98□□□□□ -1.13
RFX1P22670 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC7.98□□□□□ -1.13
RFX1P22670 AC115223.1-201ENST00000466377 870 ntBASIC7.98□□□□□ -1.13
RFX1P22670 AC116337.2-201ENST00000477662 156 ntBASIC7.98□□□□□ -1.13
RFX1P22670 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC7.98□□□□□ -1.13
RFX1P22670 RPL23AP80-201ENST00000495605 424 ntBASIC7.98□□□□□ -1.13
RFX1P22670 RN7SL516P-201ENST00000496127 297 ntBASIC7.98□□□□□ -1.13
RFX1P22670 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.98□□□□□ -1.13
RFX1P22670 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC7.98□□□□□ -1.13
RFX1P22670 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC7.98□□□□□ -1.13
RFX1P22670 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC7.98□□□□□ -1.13
RFX1P22670 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC7.98□□□□□ -1.13
RFX1P22670 OR6M3P-201ENST00000531567 700 ntBASIC7.98□□□□□ -1.13
RFX1P22670 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC7.98□□□□□ -1.13
RFX1P22670 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.98□□□□□ -1.13
RFX1P22670 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.98□□□□□ -1.13
RFX1P22670 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC7.98□□□□□ -1.13
RFX1P22670 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC7.98□□□□□ -1.13
RFX1P22670 AL512347.1-201ENST00000566420 503 ntBASIC7.98□□□□□ -1.13
RFX1P22670 ARGFXP2-201ENST00000579304 949 ntBASIC7.98□□□□□ -1.13
RFX1P22670 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC7.98□□□□□ -1.13
RFX1P22670 AC008507.1-201ENST00000587506 734 ntBASIC7.98□□□□□ -1.13
RFX1P22670 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC7.98□□□□□ -1.13
RFX1P22670 AC009955.2-201ENST00000597288 542 ntBASIC7.98□□□□□ -1.13
RFX1P22670 AC112220.3-201ENST00000605502 502 ntBASIC7.98□□□□□ -1.13
RFX1P22670 AL136139.1-201ENST00000605568 222 ntBASIC7.98□□□□□ -1.13
RFX1P22670 AC092354.1-201ENST00000606057 376 ntBASIC7.98□□□□□ -1.13
RFX1P22670 AL031775.1-201ENST00000607014 887 ntBASIC7.98□□□□□ -1.13
RFX1P22670 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RFX1P22670 MIR6889-201ENST00000613185 59 ntBASIC7.98□□□□□ -1.13
RFX1P22670 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RFX1P22670 AL603839.4-201ENST00000624658 1005 ntBASIC7.98□□□□□ -1.13
RFX1P22670 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.98□□□□□ -1.13
RFX1P22670 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.98□□□□□ -1.13
RFX1P22670 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.98□□□□□ -1.13
RFX1P22670 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
RFX1P22670 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RFX1P22670 AP002364.1-201ENST00000623330 3386 ntBASIC7.98□□□□□ -1.13
RFX1P22670 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RFX1P22670 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.98□□□□□ -1.13
RFX1P22670 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RFX1P22670 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
RFX1P22670 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.98□□□□□ -1.13
RFX1P22670 VEZF1P1-201ENST00000423931 1541 ntBASIC7.98□□□□□ -1.13
RFX1P22670 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.98□□□□□ -1.13
RFX1P22670 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RFX1P22670 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RFX1P22670 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.97□□□□□ -1.13
RFX1P22670 AL354854.1-201ENST00000455940 1363 ntBASIC7.97□□□□□ -1.13
RFX1P22670 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RFX1P22670 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
RFX1P22670 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
RFX1P22670 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RFX1P22670 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
RFX1P22670 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.97□□□□□ -1.13
RFX1P22670 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC7.97□□□□□ -1.13
RFX1P22670 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RFX1P22670 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC7.97□□□□□ -1.13
RFX1P22670 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RFX1P22670 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RFX1P22670 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RFX1P22670 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
RFX1P22670 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC7.97□□□□□ -1.13
RFX1P22670 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC7.97□□□□□ -1.13
RFX1P22670 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
RFX1P22670 AL034417.1-201ENST00000399343 800 ntBASIC7.97□□□□□ -1.13
RFX1P22670 AC244452.1-201ENST00000413798 141 ntBASIC7.97□□□□□ -1.13
RFX1P22670 AL157698.1-201ENST00000415190 1011 ntBASIC7.97□□□□□ -1.13
RFX1P22670 AL009174.1-201ENST00000426577 416 ntBASIC7.97□□□□□ -1.13
RFX1P22670 AC009362.1-201ENST00000427253 406 ntBASIC7.97□□□□□ -1.13
RFX1P22670 OFD1P13Y-201ENST00000431179 1232 ntBASIC7.97□□□□□ -1.13
RFX1P22670 PCNPP2-201ENST00000441651 455 ntBASIC7.97□□□□□ -1.13
RFX1P22670 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.97□□□□□ -1.13
RFX1P22670 AL935212.3-201ENST00000450729 284 ntBASIC7.97□□□□□ -1.13
RFX1P22670 AL133480.2-201ENST00000456723 487 ntBASIC7.97□□□□□ -1.13
RFX1P22670 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7.97□□□□□ -1.13
RFX1P22670 PABPC1P10-201ENST00000464731 381 ntBASIC7.97□□□□□ -1.13
RFX1P22670 RPL23P10-201ENST00000468780 412 ntBASIC7.97□□□□□ -1.13
RFX1P22670 RN7SL456P-201ENST00000469290 295 ntBASIC7.97□□□□□ -1.13
RFX1P22670 AC084878.1-201ENST00000480555 648 ntBASIC7.97□□□□□ -1.13
RFX1P22670 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RFX1P22670 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RFX1P22670 DYNLL1P6-201ENST00000503440 264 ntBASIC7.97□□□□□ -1.13
RFX1P22670 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RFX1P22670 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RFX1P22670 FGB-207ENST00000509493 1164 ntTSL 5 BASIC7.97□□□□□ -1.13
RFX1P22670 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.97□□□□□ -1.13
RFX1P22670 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC7.97□□□□□ -1.13
RFX1P22670 RPL7L1P4-201ENST00000513004 707 ntBASIC7.97□□□□□ -1.13
RFX1P22670 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RFX1P22670 RNU6-1225P-201ENST00000516336 65 ntBASIC7.97□□□□□ -1.13
RFX1P22670 RPL10P18-201ENST00000519384 309 ntBASIC7.97□□□□□ -1.13
RFX1P22670 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC7.97□□□□□ -1.13
RFX1P22670 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
RFX1P22670 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms