Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH3P22223 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.85□□□□□ -1.47
CDH3P22223 OR4H6P-201ENST00000563771 921 ntBASIC5.85□□□□□ -1.47
CDH3P22223 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH3P22223 AC090236.2-201ENST00000587933 1101 ntBASIC5.85□□□□□ -1.47
CDH3P22223 AC020916.2-201ENST00000591242 360 ntBASIC5.85□□□□□ -1.47
CDH3P22223 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH3P22223 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH3P22223 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH3P22223 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH3P22223 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
CDH3P22223 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDH3P22223 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CDH3P22223 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CDH3P22223 BCORP1-203ENST00000513194 5093 ntBASIC5.85□□□□□ -1.47
CDH3P22223 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH3P22223 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CDH3P22223 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH3P22223 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDH3P22223 PSG10P-201ENST00000501199 1500 ntBASIC5.84□□□□□ -1.47
CDH3P22223 AOX3P-204ENST00000491025 2107 ntBASIC5.84□□□□□ -1.47
CDH3P22223 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH3P22223 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH3P22223 AC119674.1-202ENST00000641333 1860 ntBASIC5.84□□□□□ -1.47
CDH3P22223 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH3P22223 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDH3P22223 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH3P22223 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CDH3P22223 AC023490.2-201ENST00000359859 470 ntBASIC5.84□□□□□ -1.47
CDH3P22223 RNU105B-201ENST00000364478 208 ntBASIC5.84□□□□□ -1.47
CDH3P22223 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.84□□□□□ -1.47
CDH3P22223 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH3P22223 SNRPEP6-201ENST00000407465 277 ntBASIC5.84□□□□□ -1.47
CDH3P22223 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH3P22223 HMGN1P20-201ENST00000411849 300 ntBASIC5.84□□□□□ -1.47
CDH3P22223 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.84□□□□□ -1.47
CDH3P22223 RPS15AP30-201ENST00000420976 390 ntBASIC5.84□□□□□ -1.47
CDH3P22223 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.84□□□□□ -1.47
CDH3P22223 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.84□□□□□ -1.47
CDH3P22223 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH3P22223 AC144530.1-201ENST00000452862 555 ntBASIC5.84□□□□□ -1.47
CDH3P22223 AC112187.1-201ENST00000455837 479 ntBASIC5.84□□□□□ -1.47
CDH3P22223 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.84□□□□□ -1.47
CDH3P22223 DEFB109A-201ENST00000482450 265 ntBASIC5.84□□□□□ -1.47
CDH3P22223 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.84□□□□□ -1.47
CDH3P22223 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.84□□□□□ -1.47
CDH3P22223 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
CDH3P22223 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.84□□□□□ -1.47
CDH3P22223 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.84□□□□□ -1.47
CDH3P22223 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH3P22223 AP005119.1-201ENST00000580956 292 ntBASIC5.84□□□□□ -1.47
CDH3P22223 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.84□□□□□ -1.47
CDH3P22223 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.84□□□□□ -1.47
CDH3P22223 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH3P22223 AC020658.4-201ENST00000613987 684 ntBASIC5.84□□□□□ -1.47
CDH3P22223 AC096861.1-201ENST00000616652 240 ntBASIC5.84□□□□□ -1.47
CDH3P22223 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
CDH3P22223 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH3P22223 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
CDH3P22223 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CDH3P22223 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CDH3P22223 AC010266.2-201ENST00000564741 3255 ntBASIC5.84□□□□□ -1.48
CDH3P22223 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CDH3P22223 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH3P22223 AC092692.1-201ENST00000623625 2595 ntBASIC5.83□□□□□ -1.48
CDH3P22223 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH3P22223 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH3P22223 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH3P22223 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH3P22223 RNFT1P3-201ENST00000340898 1052 ntBASIC5.83□□□□□ -1.48
CDH3P22223 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH3P22223 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH3P22223 RNU2-22P-201ENST00000411266 212 ntBASIC5.83□□□□□ -1.48
CDH3P22223 IPPKP1-201ENST00000422501 768 ntBASIC5.83□□□□□ -1.48
CDH3P22223 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH3P22223 AL445466.1-201ENST00000448432 357 ntBASIC5.83□□□□□ -1.48
CDH3P22223 HLA-DPA3-207ENST00000454398 229 ntBASIC5.83□□□□□ -1.48
CDH3P22223 AL445687.2-201ENST00000458156 728 ntBASIC5.83□□□□□ -1.48
CDH3P22223 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH3P22223 RN7SL352P-201ENST00000466002 277 ntBASIC5.83□□□□□ -1.48
CDH3P22223 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH3P22223 AC006499.4-201ENST00000510947 694 ntBASIC5.83□□□□□ -1.48
CDH3P22223 RNU6-551P-201ENST00000516661 103 ntBASIC5.83□□□□□ -1.48
CDH3P22223 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH3P22223 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH3P22223 OR6M2P-201ENST00000529831 871 ntBASIC5.83□□□□□ -1.48
CDH3P22223 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH3P22223 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH3P22223 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH3P22223 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH3P22223 AC108673.3-201ENST00000609183 335 ntBASIC5.83□□□□□ -1.48
CDH3P22223 FO681491.1-202ENST00000623392 737 ntBASIC5.83□□□□□ -1.48
CDH3P22223 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CDH3P22223 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH3P22223 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CDH3P22223 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH3P22223 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH3P22223 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH3P22223 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CDH3P22223 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms