Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 RNU6-697P-201ENST00000363348 107 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 MIR143-201ENST00000385300 106 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 AL121835.1-201ENST00000404250 354 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 SNRPEP6-201ENST00000407465 277 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 RN7SKP286-201ENST00000410894 299 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 RNU6-564P-201ENST00000410983 104 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 NMD3P2-201ENST00000421815 761 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 BX323845.3-201ENST00000428215 527 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 RPL7L1P3-201ENST00000455249 689 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 AC103563.5-201ENST00000455643 364 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 RPL31P53-201ENST00000457065 348 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 UBFD1P1-201ENST00000473259 814 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 RN7SL717P-201ENST00000478343 297 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 GAPDHP71-201ENST00000511530 1003 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 SNORA70.20-201ENST00000516848 126 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 AC020978.7-201ENST00000575953 1187 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 BX322635.1-201ENST00000605804 496 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 AC239803.2-201ENST00000610161 430 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 MIR6886-201ENST00000619864 61 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 PDZK1P1-202ENST00000425209 1350 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 AL731532.1-201ENST00000623972 4236 ntBASIC5.63□□□□□ -1.51
RAB40ALP0C0E4 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 MTHFD2P5-201ENST00000320415 844 ntBASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 OR10R3P-201ENST00000361688 942 ntBASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 GNG5P2-201ENST00000372054 207 ntBASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 AL607077.1-201ENST00000401718 499 ntBASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 AL139039.2-201ENST00000407436 479 ntBASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 RAB9AP4-201ENST00000415230 609 ntBASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 RPL34P3-201ENST00000421454 338 ntBASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 AC007064.3-201ENST00000422608 359 ntBASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 AJ239321.1-201ENST00000424255 564 ntBASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 BX119321.1-201ENST00000428912 797 ntBASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 AC064862.4-201ENST00000442180 334 ntBASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 AC023141.9-201ENST00000458734 412 ntBASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 RN7SL352P-201ENST00000466002 277 ntBASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 RPSAP37-201ENST00000470913 821 ntBASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 AC124945.1-201ENST00000485133 188 ntBASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 RN7SL57P-201ENST00000493687 290 ntBASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 GOLGA5P1-201ENST00000507317 980 ntBASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 SCARNA21.2-201ENST00000516600 166 ntBASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 OR4A40P-201ENST00000533878 948 ntBASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 AC006530.1-201ENST00000555980 571 ntBASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 AC090651.1-201ENST00000567865 634 ntBASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 AC005229.3-201ENST00000603438 323 ntBASIC5.62□□□□□ -1.51
RAB40ALP0C0E4 FAM27E4-201ENST00000605259 342 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms