Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
FREM3P0C091 RN7SKP162-201ENST00000363605 345 ntBASIC5.15□□□□□ -1.58
FREM3P0C091 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
FREM3P0C091 RPSAP35-201ENST00000413753 818 ntBASIC5.15□□□□□ -1.58
FREM3P0C091 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.15□□□□□ -1.58
FREM3P0C091 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.15□□□□□ -1.58
FREM3P0C091 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.15□□□□□ -1.58
FREM3P0C091 RNA5SP116-201ENST00000516132 98 ntBASIC5.15□□□□□ -1.58
FREM3P0C091 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.15□□□□□ -1.58
FREM3P0C091 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.15□□□□□ -1.58
FREM3P0C091 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.15□□□□□ -1.58
FREM3P0C091 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
FREM3P0C091 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
FREM3P0C091 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
FREM3P0C091 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.15□□□□□ -1.58
FREM3P0C091 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
FREM3P0C091 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
FREM3P0C091 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
FREM3P0C091 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
FREM3P0C091 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
FREM3P0C091 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
FREM3P0C091 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.15□□□□□ -1.58
FREM3P0C091 AC027279.4-201ENST00000624371 2072 ntBASIC5.15□□□□□ -1.58
FREM3P0C091 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
FREM3P0C091 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
FREM3P0C091 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
FREM3P0C091 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
FREM3P0C091 NIFKP3-201ENST00000417799 865 ntBASIC5.15□□□□□ -1.59
FREM3P0C091 RPL36AP39-201ENST00000445859 318 ntBASIC5.15□□□□□ -1.59
FREM3P0C091 MEMO1P4-201ENST00000453590 386 ntBASIC5.15□□□□□ -1.59
FREM3P0C091 OSTCP1-201ENST00000455507 450 ntBASIC5.15□□□□□ -1.59
FREM3P0C091 RPS17P15-201ENST00000475609 349 ntBASIC5.15□□□□□ -1.59
FREM3P0C091 AC006499.3-201ENST00000506077 748 ntBASIC5.15□□□□□ -1.59
FREM3P0C091 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
FREM3P0C091 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.15□□□□□ -1.59
FREM3P0C091 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.15□□□□□ -1.59
FREM3P0C091 MIR4489-201ENST00000578869 62 ntBASIC5.15□□□□□ -1.59
FREM3P0C091 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
FREM3P0C091 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.15□□□□□ -1.59
FREM3P0C091 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.15□□□□□ -1.59
FREM3P0C091 AL049767.1-202ENST00000637826 242 ntBASIC5.15□□□□□ -1.59
FREM3P0C091 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
FREM3P0C091 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
FREM3P0C091 AC004076.2-201ENST00000620532 3323 ntBASIC5.15□□□□□ -1.59
FREM3P0C091 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
FREM3P0C091 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
FREM3P0C091 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
FREM3P0C091 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
FREM3P0C091 THAP12P9-201ENST00000503971 2360 ntBASIC5.14□□□□□ -1.59
FREM3P0C091 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
FREM3P0C091 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
FREM3P0C091 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.14□□□□□ -1.59
FREM3P0C091 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
FREM3P0C091 LINC02019-201ENST00000608605 2060 ntBASIC5.14□□□□□ -1.59
FREM3P0C091 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.14□□□□□ -1.59
FREM3P0C091 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
FREM3P0C091 U3.28-201ENST00000391249 210 ntBASIC5.14□□□□□ -1.59
FREM3P0C091 TNPO1P1-201ENST00000423641 1138 ntBASIC5.14□□□□□ -1.59
FREM3P0C091 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
FREM3P0C091 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.14□□□□□ -1.59
FREM3P0C091 PFN1P6-201ENST00000476786 399 ntBASIC5.14□□□□□ -1.59
FREM3P0C091 AC008638.1-201ENST00000506035 866 ntBASIC5.14□□□□□ -1.59
FREM3P0C091 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.14□□□□□ -1.59
FREM3P0C091 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.14□□□□□ -1.59
FREM3P0C091 MRPS16P1-201ENST00000523462 412 ntBASIC5.14□□□□□ -1.59
FREM3P0C091 OR5AM1P-201ENST00000532136 1032 ntBASIC5.14□□□□□ -1.59
FREM3P0C091 IGBP1P1-201ENST00000554337 1009 ntBASIC5.14□□□□□ -1.59
FREM3P0C091 DPPA3P2-202ENST00000557188 1219 ntBASIC5.14□□□□□ -1.59
FREM3P0C091 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.14□□□□□ -1.59
FREM3P0C091 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
FREM3P0C091 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC5.14□□□□□ -1.59
FREM3P0C091 AC093297.3-201ENST00000607056 2517 ntBASIC5.14□□□□□ -1.59
FREM3P0C091 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.14□□□□□ -1.59
FREM3P0C091 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
FREM3P0C091 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.14□□□□□ -1.59
FREM3P0C091 AC068870.1-201ENST00000563737 2455 ntBASIC5.14□□□□□ -1.59
FREM3P0C091 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
FREM3P0C091 AC117409.1-201ENST00000470499 1310 ntBASIC5.14□□□□□ -1.59
FREM3P0C091 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.14□□□□□ -1.59
FREM3P0C091 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.14□□□□□ -1.59
FREM3P0C091 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.14□□□□□ -1.59
FREM3P0C091 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
FREM3P0C091 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
FREM3P0C091 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
FREM3P0C091 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.14□□□□□ -1.59
FREM3P0C091 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
FREM3P0C091 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
FREM3P0C091 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.14□□□□□ -1.59
FREM3P0C091 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.14□□□□□ -1.59
FREM3P0C091 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.14□□□□□ -1.59
FREM3P0C091 PRUNEP1-201ENST00000425846 705 ntBASIC5.14□□□□□ -1.59
FREM3P0C091 AC005033.1-201ENST00000428904 813 ntBASIC5.14□□□□□ -1.59
FREM3P0C091 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.14□□□□□ -1.59
FREM3P0C091 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.14□□□□□ -1.59
FREM3P0C091 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.14□□□□□ -1.59
FREM3P0C091 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.14□□□□□ -1.59
FREM3P0C091 AC011225.1-201ENST00000457751 369 ntBASIC5.14□□□□□ -1.59
FREM3P0C091 RN7SL72P-201ENST00000460697 269 ntBASIC5.14□□□□□ -1.59
FREM3P0C091 SIAH1P1-201ENST00000479411 923 ntBASIC5.14□□□□□ -1.59
FREM3P0C091 AC099521.1-201ENST00000482557 334 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms