Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC4.35□□□□□ -1.71
CXCL1P09341 AC135983.3-201ENST00000528049 1226 ntBASIC4.35□□□□□ -1.71
CXCL1P09341 OR9G2P-201ENST00000533326 880 ntBASIC4.35□□□□□ -1.71
CXCL1P09341 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CXCL1P09341 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC4.35□□□□□ -1.71
CXCL1P09341 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.35□□□□□ -1.71
CXCL1P09341 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.35□□□□□ -1.71
CXCL1P09341 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
CXCL1P09341 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC4.35□□□□□ -1.71
CXCL1P09341 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.35□□□□□ -1.71
CXCL1P09341 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC4.35□□□□□ -1.71
CXCL1P09341 RN7SL435P-201ENST00000584418 282 ntBASIC4.35□□□□□ -1.71
CXCL1P09341 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.35□□□□□ -1.71
CXCL1P09341 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC4.35□□□□□ -1.71
CXCL1P09341 AL121985.3-201ENST00000620690 523 ntBASIC4.35□□□□□ -1.71
CXCL1P09341 AC073869.10-201ENST00000642016 354 ntBASIC4.35□□□□□ -1.71
CXCL1P09341 AP004607.3-201ENST00000530354 3915 ntBASIC4.35□□□□□ -1.71
CXCL1P09341 AC022417.1-201ENST00000624768 1303 ntBASIC4.35□□□□□ -1.71
CXCL1P09341 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CXCL1P09341 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CXCL1P09341 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.35□□□□□ -1.71
CXCL1P09341 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CXCL1P09341 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CXCL1P09341 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
CXCL1P09341 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
CXCL1P09341 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.35□□□□□ -1.71
CXCL1P09341 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CXCL1P09341 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.34□□□□□ -1.71
CXCL1P09341 AL359715.3-201ENST00000569267 2123 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CXCL1P09341 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
CXCL1P09341 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CXCL1P09341 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CXCL1P09341 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CXCL1P09341 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CXCL1P09341 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CXCL1P09341 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
CXCL1P09341 AC083843.2-201ENST00000568248 6253 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CXCL1P09341 AL121886.1-201ENST00000358609 435 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 RNA5SP485-201ENST00000365053 119 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC4.34□□□□□ -1.71
CXCL1P09341 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CXCL1P09341 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CXCL1P09341 MIR301B-201ENST00000390813 78 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 AC005042.1-201ENST00000393397 800 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC4.34□□□□□ -1.71
CXCL1P09341 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CXCL1P09341 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC4.34□□□□□ -1.71
CXCL1P09341 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC4.34□□□□□ -1.71
CXCL1P09341 HSPD1P12-201ENST00000429127 1069 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 RPL7AP49-201ENST00000429522 581 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 OR6R1P-201ENST00000431838 940 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 AL591438.1-201ENST00000433508 581 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.34□□□□□ -1.71
CXCL1P09341 AC234771.4-201ENST00000441416 730 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.34□□□□□ -1.71
CXCL1P09341 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.34□□□□□ -1.71
CXCL1P09341 AC090804.1-201ENST00000448870 490 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.34□□□□□ -1.71
CXCL1P09341 EIF3LP2-201ENST00000457262 807 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.34□□□□□ -1.71
CXCL1P09341 RPL34P33-201ENST00000486062 334 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 AC009567.2-201ENST00000502989 349 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 EIF3KP3-201ENST00000514461 639 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 RNA5SP206-201ENST00000516703 121 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.34□□□□□ -1.71
CXCL1P09341 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC4.34□□□□□ -1.71
CXCL1P09341 AC021269.1-201ENST00000526860 705 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 AC027026.1-201ENST00000532323 742 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.34□□□□□ -1.71
CXCL1P09341 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.34□□□□□ -1.71
CXCL1P09341 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC4.34□□□□□ -1.71
CXCL1P09341 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.34□□□□□ -1.71
CXCL1P09341 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.34□□□□□ -1.71
CXCL1P09341 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.34□□□□□ -1.71
CXCL1P09341 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC4.34□□□□□ -1.71
CXCL1P09341 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.34□□□□□ -1.71
CXCL1P09341 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.34□□□□□ -1.71
CXCL1P09341 NQO2-209ENST00000606474 470 ntTSL 3 BASIC4.34□□□□□ -1.71
CXCL1P09341 AL645933.2-201ENST00000606743 1207 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC4.34□□□□□ -1.71
CXCL1P09341 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC4.34□□□□□ -1.71
CXCL1P09341 AC073869.7-201ENST00000640874 297 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CXCL1P09341 FANCD2P2-201ENST00000437591 1400 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.34□□□□□ -1.71
CXCL1P09341 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.34□□□□□ -1.71
CXCL1P09341 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CXCL1P09341 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CXCL1P09341 OR4F13P-202ENST00000560066 2054 ntBASIC4.34□□□□□ -1.71
CXCL1P09341 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.72
CXCL1P09341 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CXCL1P09341 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CXCL1P09341 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
CXCL1P09341 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.34□□□□□ -1.72
CXCL1P09341 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CXCL1P09341 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CXCL1P09341 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL1P09341 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms