Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 OR4F13P-202ENST00000560066 2054 ntBASIC5.7□□□□□ -1.5
HLA-DQB2P05538 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 RNF10P1-201ENST00000418589 369 ntBASIC5.7□□□□□ -1.5
HLA-DQB2P05538 AKR1B10P1-201ENST00000425765 942 ntBASIC5.7□□□□□ -1.5
HLA-DQB2P05538 AC113412.1-201ENST00000425840 504 ntBASIC5.7□□□□□ -1.5
HLA-DQB2P05538 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 AC005297.1-201ENST00000444765 862 ntBASIC5.7□□□□□ -1.5
HLA-DQB2P05538 EEF1B2P6-201ENST00000445713 673 ntBASIC5.7□□□□□ -1.5
HLA-DQB2P05538 LRRC37A14P-201ENST00000452297 462 ntBASIC5.7□□□□□ -1.5
HLA-DQB2P05538 AP000547.1-201ENST00000454360 617 ntBASIC5.7□□□□□ -1.5
HLA-DQB2P05538 RPL12P24-201ENST00000474907 486 ntBASIC5.7□□□□□ -1.5
HLA-DQB2P05538 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 PMS2P3-207ENST00000529061 717 ntBASIC5.7□□□□□ -1.5
HLA-DQB2P05538 TRIM51DP-201ENST00000529746 596 ntBASIC5.7□□□□□ -1.5
HLA-DQB2P05538 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 AC009962.1-201ENST00000567327 3813 ntBASIC5.7□□□□□ -1.5
HLA-DQB2P05538 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 MIR6861-201ENST00000618657 64 ntBASIC5.7□□□□□ -1.5
HLA-DQB2P05538 AL355834.1-201ENST00000556602 3965 ntBASIC5.7□□□□□ -1.5
HLA-DQB2P05538 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DQB2P05538 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 AC018809.2-201ENST00000602436 3823 ntBASIC5.69□□□□□ -1.5
HLA-DQB2P05538 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 RNF19BPY-201ENST00000458209 1550 ntBASIC5.69□□□□□ -1.5
HLA-DQB2P05538 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 AC114786.1-201ENST00000512892 1415 ntBASIC5.69□□□□□ -1.5
HLA-DQB2P05538 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 OR56A4-201ENST00000330728 1209 ntBASIC5.69□□□□□ -1.5
HLA-DQB2P05538 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 RPSAP35-201ENST00000413753 818 ntBASIC5.69□□□□□ -1.5
HLA-DQB2P05538 AL596266.1-201ENST00000448132 400 ntBASIC5.69□□□□□ -1.5
HLA-DQB2P05538 SNORD125-201ENST00000459538 96 ntBASIC5.69□□□□□ -1.5
HLA-DQB2P05538 RN7SL72P-201ENST00000460697 269 ntBASIC5.69□□□□□ -1.5
HLA-DQB2P05538 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 ATP5LP5-201ENST00000483050 299 ntBASIC5.69□□□□□ -1.5
HLA-DQB2P05538 RN7SL284P-201ENST00000498823 275 ntBASIC5.69□□□□□ -1.5
HLA-DQB2P05538 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.69□□□□□ -1.5
HLA-DQB2P05538 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 OR8Q1P-201ENST00000526467 655 ntBASIC5.69□□□□□ -1.5
HLA-DQB2P05538 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 AC122688.1-201ENST00000541494 223 ntBASIC5.69□□□□□ -1.5
HLA-DQB2P05538 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 IGBP1P1-201ENST00000554337 1009 ntBASIC5.69□□□□□ -1.5
HLA-DQB2P05538 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 AC010547.6-201ENST00000571789 193 ntBASIC5.69□□□□□ -1.5
HLA-DQB2P05538 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 AC025574.2-201ENST00000615621 514 ntBASIC5.69□□□□□ -1.5
HLA-DQB2P05538 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 AP001962.1-201ENST00000624114 559 ntBASIC5.69□□□□□ -1.5
HLA-DQB2P05538 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 AC027279.4-201ENST00000624371 2072 ntBASIC5.69□□□□□ -1.5
HLA-DQB2P05538 AL355488.2-201ENST00000609909 2850 ntBASIC5.69□□□□□ -1.5
HLA-DQB2P05538 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 YES1P1-201ENST00000418510 1628 ntBASIC5.69□□□□□ -1.5
HLA-DQB2P05538 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DQB2P05538 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms