Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.94□□□□□ -1.3
MBD4O95243 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
MBD4O95243 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
MBD4O95243 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
MBD4O95243 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
MBD4O95243 AL159987.1-201ENST00000347911 293 ntBASIC6.94□□□□□ -1.3
MBD4O95243 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.94□□□□□ -1.3
MBD4O95243 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
MBD4O95243 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.94□□□□□ -1.3
MBD4O95243 CBX1P3-201ENST00000413296 527 ntBASIC6.94□□□□□ -1.3
MBD4O95243 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.94□□□□□ -1.3
MBD4O95243 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.94□□□□□ -1.3
MBD4O95243 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.94□□□□□ -1.3
MBD4O95243 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
MBD4O95243 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.94□□□□□ -1.3
MBD4O95243 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.94□□□□□ -1.3
MBD4O95243 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
MBD4O95243 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.94□□□□□ -1.3
MBD4O95243 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
MBD4O95243 AC006539.1-201ENST00000481419 501 ntBASIC6.94□□□□□ -1.3
MBD4O95243 RNU6-551P-201ENST00000516661 103 ntBASIC6.94□□□□□ -1.3
MBD4O95243 CYCSP22-201ENST00000517555 339 ntBASIC6.94□□□□□ -1.3
MBD4O95243 AC112191.2-201ENST00000522428 333 ntBASIC6.94□□□□□ -1.3
MBD4O95243 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.94□□□□□ -1.3
MBD4O95243 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.94□□□□□ -1.3
MBD4O95243 AL049874.4-201ENST00000557593 255 ntBASIC6.94□□□□□ -1.3
MBD4O95243 AC020978.7-201ENST00000575953 1187 ntBASIC6.94□□□□□ -1.3
MBD4O95243 AP001496.3-201ENST00000580230 913 ntBASIC6.94□□□□□ -1.3
MBD4O95243 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.94□□□□□ -1.3
MBD4O95243 RN7SL787P-201ENST00000613000 284 ntBASIC6.94□□□□□ -1.3
MBD4O95243 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.94□□□□□ -1.3
MBD4O95243 AC126175.1-201ENST00000617041 758 ntBASIC6.94□□□□□ -1.3
MBD4O95243 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
MBD4O95243 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
MBD4O95243 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.94□□□□□ -1.3
MBD4O95243 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
MBD4O95243 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
MBD4O95243 AC007159.1-201ENST00000566529 4706 ntBASIC6.94□□□□□ -1.3
MBD4O95243 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
MBD4O95243 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
MBD4O95243 AP000432.2-201ENST00000624164 2048 ntBASIC6.93□□□□□ -1.3
MBD4O95243 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.93□□□□□ -1.3
MBD4O95243 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
MBD4O95243 AL022323.4-201ENST00000623980 13120 ntBASIC6.93□□□□□ -1.3
MBD4O95243 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
MBD4O95243 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
MBD4O95243 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
MBD4O95243 SNORA64.1-201ENST00000362600 132 ntBASIC6.93□□□□□ -1.3
MBD4O95243 RNA5SP514-201ENST00000363717 111 ntBASIC6.93□□□□□ -1.3
MBD4O95243 RNA5SP435-201ENST00000364044 108 ntBASIC6.93□□□□□ -1.3
MBD4O95243 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
MBD4O95243 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
MBD4O95243 AC096644.3-201ENST00000416788 338 ntBASIC6.93□□□□□ -1.3
MBD4O95243 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.93□□□□□ -1.3
MBD4O95243 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.93□□□□□ -1.3
MBD4O95243 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.93□□□□□ -1.3
MBD4O95243 AC096775.1-201ENST00000437724 448 ntBASIC6.93□□□□□ -1.3
MBD4O95243 AP000281.1-201ENST00000444036 316 ntBASIC6.93□□□□□ -1.3
MBD4O95243 OSTCP1-201ENST00000455507 450 ntBASIC6.93□□□□□ -1.3
MBD4O95243 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
MBD4O95243 AC022215.1-201ENST00000481770 362 ntBASIC6.93□□□□□ -1.3
MBD4O95243 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.93□□□□□ -1.3
MBD4O95243 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.93□□□□□ -1.3
MBD4O95243 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.93□□□□□ -1.3
MBD4O95243 AC116158.1-201ENST00000560231 2129 ntBASIC6.93□□□□□ -1.3
MBD4O95243 AC012146.2-201ENST00000576545 416 ntBASIC6.93□□□□□ -1.3
MBD4O95243 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.93□□□□□ -1.3
MBD4O95243 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.93□□□□□ -1.3
MBD4O95243 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.93□□□□□ -1.3
MBD4O95243 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.93□□□□□ -1.3
MBD4O95243 AC079791.1-201ENST00000605356 973 ntBASIC6.93□□□□□ -1.3
MBD4O95243 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.93□□□□□ -1.3
MBD4O95243 RNA5SP440-201ENST00000612665 119 ntBASIC6.93□□□□□ -1.3
MBD4O95243 MIR6862-1-201ENST00000613016 70 ntBASIC6.93□□□□□ -1.3
MBD4O95243 MIR6862-2-201ENST00000614755 70 ntBASIC6.93□□□□□ -1.3
MBD4O95243 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
MBD4O95243 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.93□□□□□ -1.3
MBD4O95243 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
MBD4O95243 SAMMSON-210ENST00000641260 1308 ntBASIC6.93□□□□□ -1.3
MBD4O95243 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
MBD4O95243 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.93□□□□□ -1.3
MBD4O95243 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
MBD4O95243 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
MBD4O95243 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
MBD4O95243 GTF2IP4-201ENST00000453092 2054 ntBASIC6.92□□□□□ -1.3
MBD4O95243 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
MBD4O95243 AC068769.1-201ENST00000474767 2426 ntBASIC6.92□□□□□ -1.3
MBD4O95243 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.92□□□□□ -1.3
MBD4O95243 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.92□□□□□ -1.3
MBD4O95243 MFSD8-239ENST00000641590 2479 ntBASIC6.92□□□□□ -1.3
MBD4O95243 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.92□□□□□ -1.3
MBD4O95243 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.92□□□□□ -1.3
MBD4O95243 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
MBD4O95243 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
MBD4O95243 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
MBD4O95243 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
MBD4O95243 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
MBD4O95243 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
MBD4O95243 RN7SKP81-201ENST00000365603 331 ntBASIC6.92□□□□□ -1.3
MBD4O95243 AL451142.1-201ENST00000375867 775 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms