Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 BCAS2P1-201ENST00000528022 632 ntBASIC5.39□□□□□ -1.55
UPK1AO00322 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.39□□□□□ -1.55
UPK1AO00322 HMGN2P36-201ENST00000529541 409 ntBASIC5.39□□□□□ -1.55
UPK1AO00322 AP000648.1-201ENST00000529682 397 ntBASIC5.39□□□□□ -1.55
UPK1AO00322 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.39□□□□□ -1.55
UPK1AO00322 AC137627.1-201ENST00000545761 289 ntBASIC5.39□□□□□ -1.55
UPK1AO00322 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.39□□□□□ -1.55
UPK1AO00322 AC068305.2-201ENST00000550567 1205 ntBASIC5.39□□□□□ -1.55
UPK1AO00322 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
UPK1AO00322 AL031601.1-201ENST00000605702 394 ntBASIC5.39□□□□□ -1.55
UPK1AO00322 NANOGP3-201ENST00000605855 286 ntBASIC5.39□□□□□ -1.55
UPK1AO00322 AL022394.1-201ENST00000606979 292 ntBASIC5.39□□□□□ -1.55
UPK1AO00322 AC010632.3-201ENST00000611377 369 ntBASIC5.39□□□□□ -1.55
UPK1AO00322 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.39□□□□□ -1.55
UPK1AO00322 AC025262.3-201ENST00000623666 360 ntBASIC5.39□□□□□ -1.55
UPK1AO00322 AC021766.1-201ENST00000624404 741 ntBASIC5.39□□□□□ -1.55
UPK1AO00322 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.39□□□□□ -1.55
UPK1AO00322 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.39□□□□□ -1.55
UPK1AO00322 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
UPK1AO00322 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
UPK1AO00322 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.39□□□□□ -1.55
UPK1AO00322 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
UPK1AO00322 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
UPK1AO00322 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
UPK1AO00322 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
UPK1AO00322 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
UPK1AO00322 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
UPK1AO00322 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
UPK1AO00322 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.38□□□□□ -1.55
UPK1AO00322 AC239868.2-201ENST00000564237 4527 ntBASIC5.38□□□□□ -1.55
UPK1AO00322 DNM1P47-203ENST00000571780 12667 ntBASIC5.38□□□□□ -1.55
UPK1AO00322 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
UPK1AO00322 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
UPK1AO00322 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
UPK1AO00322 RNA5SP187-201ENST00000384400 119 ntBASIC5.38□□□□□ -1.55
UPK1AO00322 VN1R12P-201ENST00000403778 876 ntBASIC5.38□□□□□ -1.55
UPK1AO00322 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.38□□□□□ -1.55
UPK1AO00322 AL133482.1-201ENST00000415988 498 ntBASIC5.38□□□□□ -1.55
UPK1AO00322 AC066692.1-201ENST00000421721 457 ntBASIC5.38□□□□□ -1.55
UPK1AO00322 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.38□□□□□ -1.55
UPK1AO00322 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.38□□□□□ -1.55
UPK1AO00322 BX323845.3-201ENST00000428215 527 ntBASIC5.38□□□□□ -1.55
UPK1AO00322 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
UPK1AO00322 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.38□□□□□ -1.55
UPK1AO00322 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.38□□□□□ -1.55
UPK1AO00322 OR7E116P-201ENST00000448529 957 ntBASIC5.38□□□□□ -1.55
UPK1AO00322 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.38□□□□□ -1.55
UPK1AO00322 SNORD125-201ENST00000459538 96 ntBASIC5.38□□□□□ -1.55
UPK1AO00322 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
UPK1AO00322 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.38□□□□□ -1.55
UPK1AO00322 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.38□□□□□ -1.55
UPK1AO00322 TRIM77BP-201ENST00000524985 1119 ntBASIC5.38□□□□□ -1.55
UPK1AO00322 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.38□□□□□ -1.55
UPK1AO00322 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.38□□□□□ -1.55
UPK1AO00322 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.38□□□□□ -1.55
UPK1AO00322 AC096996.1-201ENST00000563813 325 ntBASIC5.38□□□□□ -1.55
UPK1AO00322 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.38□□□□□ -1.55
UPK1AO00322 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.38□□□□□ -1.55
UPK1AO00322 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
UPK1AO00322 AC134669.1-201ENST00000581275 672 ntBASIC5.38□□□□□ -1.55
UPK1AO00322 MIR4260-201ENST00000583107 67 ntBASIC5.38□□□□□ -1.55
UPK1AO00322 MIR4660-201ENST00000583549 74 ntBASIC5.38□□□□□ -1.55
UPK1AO00322 FAM27E4-201ENST00000605259 342 ntBASIC5.38□□□□□ -1.55
UPK1AO00322 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
UPK1AO00322 AC022919.1-201ENST00000624979 626 ntBASIC5.38□□□□□ -1.55
UPK1AO00322 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
UPK1AO00322 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
UPK1AO00322 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.38□□□□□ -1.55
UPK1AO00322 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.38□□□□□ -1.55
UPK1AO00322 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
UPK1AO00322 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
UPK1AO00322 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
UPK1AO00322 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
UPK1AO00322 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
UPK1AO00322 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.37□□□□□ -1.55
UPK1AO00322 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
UPK1AO00322 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
UPK1AO00322 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
UPK1AO00322 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
UPK1AO00322 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
UPK1AO00322 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
UPK1AO00322 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
UPK1AO00322 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
UPK1AO00322 OR7E156P-201ENST00000400303 464 ntBASIC5.37□□□□□ -1.55
UPK1AO00322 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.37□□□□□ -1.55
UPK1AO00322 RPL24P2-201ENST00000421023 475 ntBASIC5.37□□□□□ -1.55
UPK1AO00322 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.37□□□□□ -1.55
UPK1AO00322 AL035660.1-201ENST00000422041 222 ntBASIC5.37□□□□□ -1.55
UPK1AO00322 BX119904.3-201ENST00000428194 957 ntBASIC5.37□□□□□ -1.55
UPK1AO00322 RPS17P15-201ENST00000475609 349 ntBASIC5.37□□□□□ -1.55
UPK1AO00322 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.37□□□□□ -1.55
UPK1AO00322 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.37□□□□□ -1.55
UPK1AO00322 AC074255.1-201ENST00000511259 501 ntBASIC5.37□□□□□ -1.55
UPK1AO00322 AC114781.3-201ENST00000512083 142 ntBASIC5.37□□□□□ -1.55
UPK1AO00322 RNA5SP230-201ENST00000517039 122 ntBASIC5.37□□□□□ -1.55
UPK1AO00322 AC060775.1-201ENST00000518241 520 ntBASIC5.37□□□□□ -1.55
UPK1AO00322 AC138832.1-201ENST00000522871 556 ntBASIC5.37□□□□□ -1.55
UPK1AO00322 TOMM20P1-201ENST00000534518 427 ntBASIC5.37□□□□□ -1.55
UPK1AO00322 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
UPK1AO00322 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms