Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 RN7SKP184-201ENST00000362348 333 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 RNU4-39P-201ENST00000362455 127 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 RNA5SP279-201ENST00000365513 117 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SRRM4A7MD48 DNAJA1P3-201ENST00000399417 1194 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 GABARAPL3-201ENST00000412799 354 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 AC093084.1-201ENST00000424233 687 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 AL590399.2-201ENST00000427536 309 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 Z84478.1-201ENST00000438230 1219 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 TRIM60P16-201ENST00000444048 694 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 OSTCP1-201ENST00000455507 450 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 AC104164.1-201ENST00000460282 590 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 AC098818.1-201ENST00000478593 252 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 RN7SL362P-201ENST00000494228 267 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 AC015864.1-201ENST00000496512 544 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 RN7SL612P-201ENST00000497704 295 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 AC112484.3-201ENST00000505910 329 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 AC093815.1-201ENST00000508637 280 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 MAST4-IT1-201ENST00000514241 658 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 OR4A41P-201ENST00000533053 928 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 AC007346.2-201ENST00000564816 892 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 OR1E3-201ENST00000575608 948 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 MIR744-201ENST00000578242 98 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 AL162574.2-201ENST00000614618 657 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 uc_338.31-201ENST00000615595 186 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 AC003001.2-201ENST00000616294 831 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 AC073488.3-201ENST00000631611 778 ntBASIC4.79□□□□□ -1.64
SRRM4A7MD48 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SRRM4A7MD48 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SRRM4A7MD48 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
SRRM4A7MD48 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SRRM4A7MD48 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SRRM4A7MD48 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SRRM4A7MD48 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SRRM4A7MD48 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SRRM4A7MD48 RLIMP2-201ENST00000427891 1563 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SRRM4A7MD48 UGT2B24P-201ENST00000514441 1597 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
SRRM4A7MD48 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.78□□□□□ -1.64
SRRM4A7MD48 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SRRM4A7MD48 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.78□□□□□ -1.64
SRRM4A7MD48 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SRRM4A7MD48 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 KYNUP3-201ENST00000574386 1341 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.78□□□□□ -1.64
SRRM4A7MD48 PSG10P-201ENST00000501199 1500 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SRRM4A7MD48 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SRRM4A7MD48 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.78□□□□□ -1.64
SRRM4A7MD48 SPATA2P1-201ENST00000431223 2055 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 HSPD1P7-201ENST00000447985 1686 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 AL592429.1-201ENST00000403909 1473 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC4.78□□□□□ -1.64
SRRM4A7MD48 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SRRM4A7MD48 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SRRM4A7MD48 RN7SKP250-201ENST00000363924 321 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 RNA5SP211-201ENST00000365516 117 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 RNU6-1263P-201ENST00000384601 106 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 MIR137-201ENST00000385223 102 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SRRM4A7MD48 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SRRM4A7MD48 SNRPEP6-201ENST00000407465 277 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.78□□□□□ -1.64
SRRM4A7MD48 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC4.78□□□□□ -1.64
SRRM4A7MD48 RPSAP65-201ENST00000429660 595 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 RPS12P17-201ENST00000438591 377 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 AL353662.1-201ENST00000439099 327 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 HMGB1P7-201ENST00000450921 612 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 TAAR4P-201ENST00000454843 1039 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.78□□□□□ -1.64
SRRM4A7MD48 PFN1P6-201ENST00000476786 399 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 AC044810.1-201ENST00000480271 711 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 AC113367.2-201ENST00000505749 160 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.78□□□□□ -1.64
SRRM4A7MD48 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.78□□□□□ -1.64
SRRM4A7MD48 AC016550.3-201ENST00000515706 767 ntBASIC4.78□□□□□ -1.64
SRRM4A7MD48 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms