Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC144AA2RUR9 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC8.16□□□□□ -1.1
CCDC144AA2RUR9 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC8.16□□□□□ -1.1
CCDC144AA2RUR9 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
CCDC144AA2RUR9 AL033543.1-201ENST00000623440 13454 ntBASIC8.16□□□□□ -1.1
CCDC144AA2RUR9 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC8.16□□□□□ -1.1
CCDC144AA2RUR9 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 AC079753.1-201ENST00000623243 3868 ntBASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 AL034546.1-201ENST00000623740 3693 ntBASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 AP004289.1-201ENST00000436307 2205 ntBASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 RN7SKP216-201ENST00000411050 312 ntBASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 AC090638.1-201ENST00000498296 909 ntBASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 AC132068.1-201ENST00000623805 459 ntBASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 AL161912.4-201ENST00000623889 2468 ntBASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
CCDC144AA2RUR9 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC8.15□□□□□ -1.11
CCDC144AA2RUR9 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
CCDC144AA2RUR9 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CCDC144AA2RUR9 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.11
CCDC144AA2RUR9 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
CCDC144AA2RUR9 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC8.15□□□□□ -1.11
CCDC144AA2RUR9 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
CCDC144AA2RUR9 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
CCDC144AA2RUR9 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 AC073365.1-203ENST00000641055 1992 ntBASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 RPL35AP24-201ENST00000413846 330 ntBASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 USP24P1-201ENST00000433802 779 ntBASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 AC092106.1-201ENST00000444291 373 ntBASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 OTX2P1-201ENST00000450956 354 ntBASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 AC004815.1-201ENST00000484185 331 ntBASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 snoU109.5-201ENST00000516231 132 ntBASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 AC008115.4-201ENST00000619780 775 ntBASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
CCDC144AA2RUR9 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 AC009804.1-201ENST00000400949 179 ntBASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 RPL23AP17-201ENST00000401064 499 ntBASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 AL121977.1-201ENST00000401636 979 ntBASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 RN7SKP279-201ENST00000411383 298 ntBASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 RSU1P1-201ENST00000453416 441 ntBASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 AC005532.2-201ENST00000467154 373 ntBASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 NDUFA5P12-201ENST00000503796 343 ntBASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 OR4A46P-201ENST00000527255 933 ntBASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 AGGF1P7-201ENST00000562369 913 ntBASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 AC136428.4-201ENST00000634254 1155 ntBASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CCDC144AA2RUR9 AL669831.5-218ENST00000591702 1873 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms