Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC117409.1-201ENST00000470499 1310 ntBASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 AL157702.1-201ENST00000398764 426 ntBASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 RNA5SP115-201ENST00000411160 107 ntBASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 AL024507.1-201ENST00000412741 274 ntBASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 AC007568.1-201ENST00000422912 471 ntBASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 MTCO1P43-201ENST00000431831 488 ntBASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 RPSAP40-201ENST00000442343 891 ntBASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 RN7SL643P-201ENST00000471845 291 ntBASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 OR5H3P-201ENST00000502817 919 ntBASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 IGHV4-55-201ENST00000520889 368 ntBASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 NPIPB14P-203ENST00000532298 987 ntBASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 AC009120.3-201ENST00000563335 499 ntBASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 AL049844.2-201ENST00000604280 628 ntBASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 SNORA74.4-201ENST00000607595 199 ntBASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 AL356274.1-201ENST00000617064 410 ntBASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 AC022960.3-201ENST00000619794 441 ntBASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 AC009269.6-201ENST00000621778 588 ntBASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 AC073592.6-201ENST00000624271 415 ntBASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 AC011815.2-201ENST00000618230 2021 ntBASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 NCOA4P2-201ENST00000340589 1813 ntBASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 AC011369.2-201ENST00000624423 1567 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 CAP1P2-201ENST00000417455 1409 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 RN7SKP237-201ENST00000364663 301 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 RNU6-1000P-201ENST00000391066 106 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 RNU6-796P-201ENST00000391086 107 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 AL139805.1-201ENST00000407837 289 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 SNORA79B-201ENST00000410557 148 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 AL035422.1-201ENST00000414193 397 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 UBE2V1P14-201ENST00000415815 558 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 AL035458.1-201ENST00000433096 585 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 POU5F1P5-201ENST00000445059 658 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 AL096829.2-201ENST00000446582 742 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 CYCSP42-201ENST00000450823 238 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 CYCSP20-201ENST00000473154 315 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 RN7SL165P-201ENST00000477476 291 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 RPL21P47-201ENST00000483696 477 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 RN7SL714P-201ENST00000487050 298 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 HSD3BP3-201ENST00000514706 994 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 RN7SKP70-201ENST00000516655 271 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 AC011853.1-201ENST00000518911 454 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 HIGD1AP18-201ENST00000520730 278 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 AC084121.1-201ENST00000533882 835 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 AC026826.3-201ENST00000561747 158 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 OR1AB1P-201ENST00000585564 761 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 AC027334.1-201ENST00000603257 310 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 RPSAP75-201ENST00000605848 301 ntBASIC7.05□□□□□ -1.28
COL4A3BPQ9Y5P4 AC026790.2-201ENST00000606282 430 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms