Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 RNA5SP273-201ENST00000362484 113 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 RN7SKP115-201ENST00000363177 317 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 MIR585-201ENST00000384887 94 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AC005077.1-201ENST00000449226 375 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AL162739.1-201ENST00000450606 307 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 CST12P-201ENST00000457644 362 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 ACA64.4-201ENST00000459070 127 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 SLC25A51P1-201ENST00000468432 871 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 NPM1P28-201ENST00000492269 840 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AC114781.3-201ENST00000512083 142 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 RNA5SP116-201ENST00000516132 98 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 RNU6-964P-201ENST00000516524 69 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AC021733.2-201ENST00000518830 497 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AC019227.1-201ENST00000526902 510 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AP003396.4-201ENST00000527574 265 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AC044860.2-201ENST00000561005 179 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AC087468.1-201ENST00000604365 630 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AC116651.1-201ENST00000609724 556 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AL352984.2-201ENST00000611153 546 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 RN7SL787P-201ENST00000613000 284 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AL136228.1-201ENST00000622221 319 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AC018445.2-201ENST00000622987 260 ntBASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RAI2Q9Y5P3 AC027279.1-201ENST00000568885 4284 ntBASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 OR52B5P-204ENST00000641744 3467 ntBASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 RNFT1P3-201ENST00000340898 1052 ntBASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 AL096711.1-201ENST00000404780 554 ntBASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 MYL6P5-201ENST00000412707 459 ntBASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 RPL35AP3-201ENST00000414680 288 ntBASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 AL355433.1-201ENST00000422804 300 ntBASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 CFL1P4-201ENST00000451536 498 ntBASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 SDC4P-201ENST00000453285 601 ntBASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 AC104164.1-201ENST00000460282 590 ntBASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 RN7SL269P-201ENST00000467795 305 ntBASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 OR8K2P-201ENST00000524645 927 ntBASIC6.05□□□□□ -1.44
RAI2Q9Y5P3 AC007956.1-201ENST00000555623 542 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms