Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 MTND4P9-201ENST00000507819 1346 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 RNA5SP477-201ENST00000362639 119 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 Y_RNA.62-201ENST00000362840 99 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 RNA5SP478-201ENST00000364657 115 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 RN7SKP69-201ENST00000365390 305 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 RNA5SP284-201ENST00000384547 118 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 RNU6-925P-201ENST00000384629 104 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AC005522.1-201ENST00000395416 346 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AL132875.1-201ENST00000403623 949 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AL512422.1-201ENST00000407033 553 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 RNA5SP178-201ENST00000410380 128 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AL357078.2-201ENST00000416486 427 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 HLA-DPA3-207ENST00000454398 229 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 RPL31P53-201ENST00000457065 348 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 CST12P-201ENST00000457644 362 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 SNX18P26-201ENST00000458433 740 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AC012123.2-201ENST00000485809 248 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AC016550.1-201ENST00000505348 785 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AC006499.4-201ENST00000510947 694 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 Y_RNA.710-201ENST00000516975 110 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AC022826.1-201ENST00000519383 805 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AP003102.1-201ENST00000525638 661 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 OR10D4P-201ENST00000525892 951 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AC016957.2-201ENST00000616998 848 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 TCL6_3.1-201ENST00000619064 137 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AC097372.4-201ENST00000625025 466 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AC008627.1-201ENST00000517511 1704 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 HSPD1P8-201ENST00000400121 1658 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 IMMTP1-201ENST00000435590 2219 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 AL133243.2-201ENST00000610331 1621 ntBASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SSX2IPQ9Y2D8 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 OR4G1P-202ENST00000641173 1788 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 FAM32BP-201ENST00000344033 333 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 MIR323A-201ENST00000362199 86 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 LYPLA1P3-201ENST00000402650 695 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 AL355143.1-201ENST00000407101 841 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 AJ239321.1-201ENST00000424255 564 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 MTND4LP7-201ENST00000431728 294 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 TUBB4BP6-201ENST00000437576 479 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 MTND5P8-201ENST00000449817 1083 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 RN7SL101P-201ENST00000496350 279 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 PSMA2P2-201ENST00000504319 686 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 HMGN1P15-201ENST00000513870 295 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 SNORD46.2-201ENST00000516021 102 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 RNU6-760P-201ENST00000516078 97 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 RNA5SP434-201ENST00000516647 121 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 AC079600.1-201ENST00000550326 297 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms