Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AL121886.1-201ENST00000358609 435 ntBASIC5.48□□□□□ -1.53
CCDC88CQ9P219 MIR375-201ENST00000362103 64 ntBASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AL391422.1-201ENST00000402155 436 ntBASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AC016739.1-201ENST00000405359 345 ntBASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AL158827.1-201ENST00000416300 391 ntBASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AC023141.8-201ENST00000442554 208 ntBASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AC019185.1-201ENST00000442718 389 ntBASIC5.48□□□□□ -1.53
CCDC88CQ9P219 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 RBM22P1-201ENST00000578589 1214 ntBASIC5.48□□□□□ -1.53
CCDC88CQ9P219 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AC087565.3-203ENST00000641018 837 ntBASIC5.48□□□□□ -1.53
CCDC88CQ9P219 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AC114786.1-201ENST00000512892 1415 ntBASIC5.48□□□□□ -1.53
CCDC88CQ9P219 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AL355834.1-201ENST00000556602 3965 ntBASIC5.48□□□□□ -1.53
CCDC88CQ9P219 AP002833.3-201ENST00000625075 2265 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 SDHDP6-201ENST00000414693 480 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 AL513325.1-201ENST00000417716 1034 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 Z84478.1-201ENST00000438230 1219 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 AC009963.4-201ENST00000448535 339 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 FRG2FP-204ENST00000453982 852 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 AC136777.2-201ENST00000522979 358 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 WBP1LP3-201ENST00000523033 208 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 OR56A7P-201ENST00000524865 941 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 AC090022.1-201ENST00000546569 311 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 AC091078.2-201ENST00000557145 559 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 AC015712.7-201ENST00000615211 635 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 SRRM1P3-201ENST00000426911 2678 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 RNA5SP131-201ENST00000365452 119 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 VN1R110P-201ENST00000438988 971 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 PTMAP6-201ENST00000439110 327 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 RPL36AP39-201ENST00000445859 318 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 IGKV2-19-201ENST00000518132 283 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 AC106730.2-201ENST00000566641 540 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 AC016180.1-201ENST00000567945 403 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 AC104695.2-201ENST00000605056 775 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 CU639417.4-201ENST00000623928 207 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 AL049767.1-202ENST00000637826 242 ntBASIC5.47□□□□□ -1.53
CCDC88CQ9P219 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC88CQ9P219 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC88CQ9P219 AC232271.1-201ENST00000602455 2715 ntBASIC5.46□□□□□ -1.53
CCDC88CQ9P219 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.46□□□□□ -1.53
CCDC88CQ9P219 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.46□□□□□ -1.53
CCDC88CQ9P219 AC004076.2-201ENST00000620532 3323 ntBASIC5.46□□□□□ -1.53
CCDC88CQ9P219 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC88CQ9P219 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC88CQ9P219 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC88CQ9P219 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC88CQ9P219 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC88CQ9P219 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC88CQ9P219 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms