Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AC090971.3-201ENST00000557871 1041 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 EIF4A3P1-201ENST00000578499 647 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AC011374.2-201ENST00000607135 526 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AL352984.2-202ENST00000613699 155 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AP004607.9-201ENST00000618202 316 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AC005753.1-201ENST00000623837 618 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AC017104.5-201ENST00000637647 639 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AL356585.10-201ENST00000641883 123 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 AC090181.3-201ENST00000624777 1514 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CCM2LQ9NUG4 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 RNU4-7P-201ENST00000364758 141 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 RNU6-1263P-201ENST00000384601 106 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AL360271.1-201ENST00000395679 510 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AL050335.1-201ENST00000396909 869 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 MTCO2P31-201ENST00000402702 684 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 RN7SKP268-201ENST00000411107 316 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AC010385.1-201ENST00000412374 256 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AL663061.1-201ENST00000416625 580 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AC006509.1-201ENST00000420788 634 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AC023128.2-201ENST00000420880 1223 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 CR769776.1-201ENST00000441254 787 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AL031681.1-201ENST00000443304 400 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 TVP23CP1-201ENST00000450317 639 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 ZNF886P-201ENST00000450781 723 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 RPL7P45-201ENST00000455851 743 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AC093166.2-201ENST00000455969 1017 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AC091982.1-202ENST00000473923 343 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 RPS12P31-201ENST00000491419 398 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AC134050.1-201ENST00000495088 933 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AC009567.2-201ENST00000502989 349 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 CDH12P2-201ENST00000504393 298 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AC021106.1-201ENST00000509020 1058 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 MINOS1P4-201ENST00000515470 318 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AC109635.6-201ENST00000525487 1113 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 MTATP6P15-201ENST00000527233 835 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 OR5M6P-201ENST00000530227 937 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 OR4U1P-201ENST00000554958 912 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AC025283.1-201ENST00000572039 734 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 RPS27AP19-201ENST00000597285 458 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 MIR7109-201ENST00000613748 65 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AL138960.1-201ENST00000613838 513 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 CLUHP10-201ENST00000631979 980 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 CASC19-228ENST00000641414 1684 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 PPBPP2-201ENST00000513150 1362 ntBASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.28□□□□□ -1.4
CCM2LQ9NUG4 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms