Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
UPF2Q9HAU5 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
UPF2Q9HAU5 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
UPF2Q9HAU5 AC099782.1-201ENST00000425889 474 ntBASIC6.9□□□□□ -1.3
UPF2Q9HAU5 NANOGP9-201ENST00000439890 892 ntBASIC6.9□□□□□ -1.3
UPF2Q9HAU5 RPS19P6-201ENST00000441327 433 ntBASIC6.9□□□□□ -1.3
UPF2Q9HAU5 RPS7P10-201ENST00000464254 603 ntBASIC6.9□□□□□ -1.3
UPF2Q9HAU5 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC6.9□□□□□ -1.3
UPF2Q9HAU5 SEPT10P1-201ENST00000517342 1162 ntBASIC6.9□□□□□ -1.3
UPF2Q9HAU5 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
UPF2Q9HAU5 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.9□□□□□ -1.3
UPF2Q9HAU5 AC138832.1-201ENST00000522871 556 ntBASIC6.9□□□□□ -1.3
UPF2Q9HAU5 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.9□□□□□ -1.3
UPF2Q9HAU5 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.9□□□□□ -1.3
UPF2Q9HAU5 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.9□□□□□ -1.3
UPF2Q9HAU5 AC060766.1-201ENST00000590824 627 ntBASIC6.9□□□□□ -1.3
UPF2Q9HAU5 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
UPF2Q9HAU5 AC092944.2-201ENST00000605443 889 ntBASIC6.9□□□□□ -1.3
UPF2Q9HAU5 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
UPF2Q9HAU5 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.9□□□□□ -1.31
UPF2Q9HAU5 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.9□□□□□ -1.31
UPF2Q9HAU5 AP000473.2-201ENST00000602659 1537 ntBASIC6.9□□□□□ -1.31
UPF2Q9HAU5 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.31
UPF2Q9HAU5 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
UPF2Q9HAU5 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
UPF2Q9HAU5 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
UPF2Q9HAU5 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 U3.7-201ENST00000363668 216 ntBASIC6.89□□□□□ -1.31
UPF2Q9HAU5 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 AL133260.1-201ENST00000405720 405 ntBASIC6.89□□□□□ -1.31
UPF2Q9HAU5 RNA5SP198-201ENST00000410376 127 ntBASIC6.89□□□□□ -1.31
UPF2Q9HAU5 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 BTG3P1-201ENST00000435859 716 ntBASIC6.89□□□□□ -1.31
UPF2Q9HAU5 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 GEMIN2P1-201ENST00000454246 752 ntBASIC6.89□□□□□ -1.31
UPF2Q9HAU5 AC005017.1-201ENST00000482002 490 ntBASIC6.89□□□□□ -1.31
UPF2Q9HAU5 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 PRMT5P1-201ENST00000514351 598 ntBASIC6.89□□□□□ -1.31
UPF2Q9HAU5 AC079064.1-201ENST00000528365 362 ntBASIC6.89□□□□□ -1.31
UPF2Q9HAU5 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 NMNAT1P5-201ENST00000559657 841 ntBASIC6.89□□□□□ -1.31
UPF2Q9HAU5 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 AL135999.3-201ENST00000610501 812 ntBASIC6.89□□□□□ -1.31
UPF2Q9HAU5 MIR6885-201ENST00000612241 66 ntBASIC6.89□□□□□ -1.31
UPF2Q9HAU5 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 AC083899.1-201ENST00000454465 3819 ntBASIC6.89□□□□□ -1.31
UPF2Q9HAU5 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
UPF2Q9HAU5 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC6.88□□□□□ -1.31
UPF2Q9HAU5 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
UPF2Q9HAU5 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.88□□□□□ -1.31
UPF2Q9HAU5 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.88□□□□□ -1.31
UPF2Q9HAU5 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
UPF2Q9HAU5 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.88□□□□□ -1.31
UPF2Q9HAU5 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
UPF2Q9HAU5 AC068870.1-201ENST00000563737 2455 ntBASIC6.88□□□□□ -1.31
UPF2Q9HAU5 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
UPF2Q9HAU5 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.88□□□□□ -1.31
UPF2Q9HAU5 AL358178.1-201ENST00000407698 397 ntBASIC6.88□□□□□ -1.31
UPF2Q9HAU5 NIFKP3-201ENST00000417799 865 ntBASIC6.88□□□□□ -1.31
UPF2Q9HAU5 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.88□□□□□ -1.31
UPF2Q9HAU5 AL355994.1-201ENST00000424379 260 ntBASIC6.88□□□□□ -1.31
UPF2Q9HAU5 RIMKLBP2-201ENST00000424737 654 ntBASIC6.88□□□□□ -1.31
UPF2Q9HAU5 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.88□□□□□ -1.31
UPF2Q9HAU5 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.88□□□□□ -1.31
UPF2Q9HAU5 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
UPF2Q9HAU5 NPM1P28-201ENST00000492269 840 ntBASIC6.88□□□□□ -1.31
UPF2Q9HAU5 HMGN1P17-201ENST00000513734 295 ntBASIC6.88□□□□□ -1.31
UPF2Q9HAU5 AC138517.1-201ENST00000515724 568 ntBASIC6.88□□□□□ -1.31
UPF2Q9HAU5 AC009879.1-201ENST00000520029 839 ntBASIC6.88□□□□□ -1.31
UPF2Q9HAU5 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.88□□□□□ -1.31
UPF2Q9HAU5 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.88□□□□□ -1.31
UPF2Q9HAU5 WBP1LP11-201ENST00000586141 328 ntBASIC6.88□□□□□ -1.31
UPF2Q9HAU5 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.88□□□□□ -1.31
UPF2Q9HAU5 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.88□□□□□ -1.31
UPF2Q9HAU5 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.88□□□□□ -1.31
UPF2Q9HAU5 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
UPF2Q9HAU5 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.88□□□□□ -1.31
UPF2Q9HAU5 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.88□□□□□ -1.31
UPF2Q9HAU5 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.88□□□□□ -1.31
UPF2Q9HAU5 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms