Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC104689.1-201ENST00000473356 768 ntBASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 RPL12P7-201ENST00000493832 494 ntBASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 AC139272.1-201ENST00000505516 640 ntBASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 SCARNA11.1-201ENST00000516918 132 ntBASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 AL591767.3-201ENST00000554632 525 ntBASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 MIR4789-201ENST00000577469 82 ntBASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 WDR45BP1-201ENST00000583470 1029 ntBASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 AL591222.2-201ENST00000604443 754 ntBASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 AL163642.2-201ENST00000604722 1019 ntBASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 AC073137.1-201ENST00000605636 634 ntBASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 RN7SKP299-201ENST00000606679 301 ntBASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 AP003392.5-201ENST00000607857 415 ntBASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 AP000255.1-201ENST00000610276 676 ntBASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 AC099842.1-201ENST00000619919 596 ntBASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 AC131009.3-201ENST00000621809 287 ntBASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 AC005753.1-201ENST00000623837 618 ntBASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 AC003992.1-201ENST00000635364 557 ntBASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 AL390237.1-201ENST00000404226 1415 ntBASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 AC092104.1-201ENST00000497346 1441 ntBASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SEC61A2Q9H9S3 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 MTND5P29-201ENST00000458676 1807 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 ATP5BP1-201ENST00000411980 1574 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 SNX18P3-202ENST00000565670 1750 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 AC102941.1-201ENST00000567616 1537 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 HSPD1P1-201ENST00000503199 1726 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 RNA5SP176-201ENST00000390956 110 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 SLC9B1P2-201ENST00000398120 1184 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 CYCSP17-201ENST00000407870 315 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 RNU4-64P-201ENST00000410795 131 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 SEPT7P8-201ENST00000413308 775 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 RPL18AP14-201ENST00000417685 526 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 AC098826.1-201ENST00000433943 471 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 ELOCP8-201ENST00000439309 332 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 ELOCP15-201ENST00000442090 332 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 RPL6P30-201ENST00000443382 862 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 RPL34P26-201ENST00000445636 354 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 GOT2P2-201ENST00000450663 1251 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 OTX2P1-201ENST00000450956 354 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 OSTCP1-201ENST00000455507 450 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 RN7SL216P-201ENST00000471607 298 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 RN7SL849P-201ENST00000485236 295 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 RN7SL868P-201ENST00000485915 303 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 AC114940.1-201ENST00000512162 1265 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 MTCO2P32-201ENST00000514865 403 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 PTK2-220ENST00000520151 573 ntTSL 4 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 OR4A40P-201ENST00000533878 948 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 AC092375.1-201ENST00000550410 637 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 NDUFA5P11-201ENST00000567995 343 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 AGGF1P4-201ENST00000568249 801 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms