Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
NXF3Q9H4D5 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NXF3Q9H4D5 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.19□□□□□ -1.42
NXF3Q9H4D5 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
NXF3Q9H4D5 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.19□□□□□ -1.42
NXF3Q9H4D5 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
NXF3Q9H4D5 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 AC068769.1-201ENST00000474767 2426 ntBASIC6.18□□□□□ -1.42
NXF3Q9H4D5 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 BX510359.3-201ENST00000422168 306 ntBASIC6.18□□□□□ -1.42
NXF3Q9H4D5 AL133173.1-201ENST00000423458 397 ntBASIC6.18□□□□□ -1.42
NXF3Q9H4D5 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 AP000547.1-201ENST00000454360 617 ntBASIC6.18□□□□□ -1.42
NXF3Q9H4D5 RPL35AP19-201ENST00000469425 329 ntBASIC6.18□□□□□ -1.42
NXF3Q9H4D5 AC079080.1-201ENST00000479841 822 ntBASIC6.18□□□□□ -1.42
NXF3Q9H4D5 RN7SL184P-201ENST00000488308 297 ntBASIC6.18□□□□□ -1.42
NXF3Q9H4D5 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 AC078899.1-201ENST00000521432 1185 ntBASIC6.18□□□□□ -1.42
NXF3Q9H4D5 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 IGKV2-18-201ENST00000522607 343 ntBASIC6.18□□□□□ -1.42
NXF3Q9H4D5 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 RBM22P12-201ENST00000567098 1255 ntBASIC6.18□□□□□ -1.42
NXF3Q9H4D5 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 AC090607.5-201ENST00000615692 224 ntBASIC6.18□□□□□ -1.42
NXF3Q9H4D5 AC119674.1-217ENST00000641942 1086 ntBASIC6.18□□□□□ -1.42
NXF3Q9H4D5 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 AL049634.1-201ENST00000453770 1720 ntBASIC6.18□□□□□ -1.42
NXF3Q9H4D5 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NXF3Q9H4D5 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NXF3Q9H4D5 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NXF3Q9H4D5 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NXF3Q9H4D5 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NXF3Q9H4D5 SNX18P3-202ENST00000565670 1750 ntBASIC6.17□□□□□ -1.42
NXF3Q9H4D5 SNORD1C-201ENST00000363315 78 ntBASIC6.17□□□□□ -1.42
NXF3Q9H4D5 RNU6-316P-201ENST00000391027 107 ntBASIC6.17□□□□□ -1.42
NXF3Q9H4D5 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.17□□□□□ -1.42
NXF3Q9H4D5 AC006335.2-201ENST00000437993 330 ntBASIC6.17□□□□□ -1.42
NXF3Q9H4D5 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.17□□□□□ -1.42
NXF3Q9H4D5 AL450996.1-201ENST00000445574 1202 ntBASIC6.17□□□□□ -1.42
NXF3Q9H4D5 AL450023.1-201ENST00000450868 751 ntBASIC6.17□□□□□ -1.42
NXF3Q9H4D5 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.17□□□□□ -1.42
NXF3Q9H4D5 RPS4XP14-201ENST00000493072 781 ntBASIC6.17□□□□□ -1.42
NXF3Q9H4D5 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.17□□□□□ -1.42
NXF3Q9H4D5 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.17□□□□□ -1.42
NXF3Q9H4D5 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.17□□□□□ -1.42
NXF3Q9H4D5 IGKV2-19-201ENST00000518132 283 ntBASIC6.17□□□□□ -1.42
NXF3Q9H4D5 AP001804.1-201ENST00000526868 919 ntBASIC6.17□□□□□ -1.42
NXF3Q9H4D5 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.17□□□□□ -1.42
NXF3Q9H4D5 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.17□□□□□ -1.42
NXF3Q9H4D5 AL121594.2-201ENST00000541658 472 ntBASIC6.17□□□□□ -1.42
NXF3Q9H4D5 MRPS21P7-201ENST00000566937 238 ntBASIC6.17□□□□□ -1.42
NXF3Q9H4D5 AP003789.1-201ENST00000617737 605 ntBASIC6.17□□□□□ -1.42
NXF3Q9H4D5 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
NXF3Q9H4D5 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NXF3Q9H4D5 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.17□□□□□ -1.42
NXF3Q9H4D5 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NXF3Q9H4D5 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.17□□□□□ -1.42
NXF3Q9H4D5 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.17□□□□□ -1.42
NXF3Q9H4D5 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NXF3Q9H4D5 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NXF3Q9H4D5 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
NXF3Q9H4D5 RN7SKP162-201ENST00000363605 345 ntBASIC6.16□□□□□ -1.42
NXF3Q9H4D5 RNA5SP234-201ENST00000363916 119 ntBASIC6.16□□□□□ -1.42
NXF3Q9H4D5 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NXF3Q9H4D5 MARK2P12-201ENST00000420129 585 ntBASIC6.16□□□□□ -1.42
NXF3Q9H4D5 RANP1-206ENST00000455094 651 ntBASIC6.16□□□□□ -1.42
NXF3Q9H4D5 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.16□□□□□ -1.42
NXF3Q9H4D5 RPS23P2-201ENST00000463671 415 ntBASIC6.16□□□□□ -1.42
NXF3Q9H4D5 SIAH1P1-201ENST00000479411 923 ntBASIC6.16□□□□□ -1.42
NXF3Q9H4D5 AC108693.1-201ENST00000496068 432 ntBASIC6.16□□□□□ -1.42
NXF3Q9H4D5 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.16□□□□□ -1.42
NXF3Q9H4D5 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.16□□□□□ -1.42
NXF3Q9H4D5 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.16□□□□□ -1.42
NXF3Q9H4D5 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.16□□□□□ -1.42
NXF3Q9H4D5 NRBF2P4-201ENST00000520874 850 ntBASIC6.16□□□□□ -1.42
NXF3Q9H4D5 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.16□□□□□ -1.42
NXF3Q9H4D5 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.16□□□□□ -1.42
NXF3Q9H4D5 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.16□□□□□ -1.42
NXF3Q9H4D5 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.16□□□□□ -1.42
NXF3Q9H4D5 AC126615.2-201ENST00000553003 515 ntBASIC6.16□□□□□ -1.42
NXF3Q9H4D5 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.16□□□□□ -1.42
NXF3Q9H4D5 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.16□□□□□ -1.42
NXF3Q9H4D5 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms