Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 EIF5AP4-201ENST00000441206 465 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 RPL5P7-201ENST00000444235 813 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 SNORD125-201ENST00000459538 96 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 RPL32P33-201ENST00000487023 394 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AC105420.1-201ENST00000504389 582 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AC111000.5-201ENST00000506559 1178 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 RNA5SP340-201ENST00000517132 107 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 BTG1P1-201ENST00000540396 508 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AC122688.1-201ENST00000541494 223 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AC006206.1-201ENST00000544842 3387 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 CCDC58P1-201ENST00000578567 430 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 MIR4502-201ENST00000580432 81 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AC124916.2-201ENST00000604416 224 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AC018690.1-201ENST00000608144 626 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AC092266.1-201ENST00000610958 165 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AC021766.1-201ENST00000624404 741 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AC111152.1-202ENST00000635848 339 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 AC137056.2-201ENST00000624055 1958 ntBASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.76□□□□□ -1.65
HDHD3Q9BSH5 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 PWAR1-201ENST00000624188 2414 ntBASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 RN7SKP250-201ENST00000363924 321 ntBASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 RN7SKP186-201ENST00000365371 303 ntBASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 RPS6P23-201ENST00000413224 722 ntBASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AC126120.1-201ENST00000431082 470 ntBASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 PNKDP1-201ENST00000435914 430 ntBASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 ATP5LP2-201ENST00000440646 311 ntBASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AC007383.1-201ENST00000445875 636 ntBASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 KF459542.1-201ENST00000450908 553 ntBASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 CST12P-201ENST00000457644 362 ntBASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 GAPDHP71-201ENST00000511530 1003 ntBASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 PRMT5P1-201ENST00000514351 598 ntBASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 WBP1LP3-201ENST00000523033 208 ntBASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 OR4A17P-201ENST00000526032 904 ntBASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 OR4A41P-201ENST00000533053 928 ntBASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 RPA2P1-201ENST00000556557 721 ntBASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AC011500.1-201ENST00000601963 469 ntBASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AC091167.5-201ENST00000605689 894 ntBASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AC010632.3-201ENST00000611377 369 ntBASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AC097641.3-201ENST00000613523 464 ntBASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AL157762.1-201ENST00000619612 415 ntBASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 AC083837.1-201ENST00000565297 2994 ntBASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC4.75□□□□□ -1.65
HDHD3Q9BSH5 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms