Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 TRBV7-4-201ENST00000390369 347 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 FCAR-206ENST00000391724 762 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC245036.1-201ENST00000391727 309 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 EIF4A1P2-201ENST00000422633 1220 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC090044.1-201ENST00000423193 497 ntTSL 2 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC116050.1-206ENST00000423774 213 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 EIF4A1P10-201ENST00000428832 1216 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 RPSAP8-201ENST00000429844 889 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 SNRPEP4-201ENST00000435815 279 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 AP000474.1-201ENST00000441465 680 ntTSL 3 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 HSPE1P28-201ENST00000443139 211 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 VN1R6P-201ENST00000458417 907 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC018638.4-201ENST00000465971 1150 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 KLF7P1-201ENST00000490941 1048 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC068531.1-201ENST00000502398 195 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC098799.3-201ENST00000506095 438 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC021220.1-201ENST00000507445 630 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC005741.1-201ENST00000511094 432 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 PGAM4P2-201ENST00000512491 721 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 OR52H2P-201ENST00000514607 902 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 RNU4-49P-201ENST00000516080 140 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 SNORA40.12-201ENST00000516329 111 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 Vault.3-201ENST00000516676 95 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC022217.3-201ENST00000523005 352 ntTSL 3 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 AP002469.1-201ENST00000526011 1043 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC113143.1-201ENST00000534670 301 ntTSL 2 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 FRG2DP-202ENST00000566967 323 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC126773.1-201ENST00000569654 547 ntTSL 4 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC015818.5-201ENST00000578659 356 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC115621.1-201ENST00000604653 858 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 AL627309.6-201ENST00000606857 840 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC078899.5-201ENST00000612475 178 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC002094.4-201ENST00000613598 307 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 DRICH1-202ENST00000614553 687 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
USB1Q9BQ65 PDZK1P1-203ENST00000616036 577 ntTSL 4 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 HLA-B-258ENST00000640615 240 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 C16orf62-205ENST00000513947 2501 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
USB1Q9BQ65 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
USB1Q9BQ65 ZNF300P1-201ENST00000356555 1822 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
USB1Q9BQ65 LINC00927-203ENST00000558913 2878 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
USB1Q9BQ65 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 VPS45-201ENST00000369128 2224 ntTSL 2 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
USB1Q9BQ65 CDY7P-201ENST00000429883 1604 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC007126.1-201ENST00000508202 4781 ntBASIC7.63□□□□□ -1.19
USB1Q9BQ65 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 NCKAP1L-202ENST00000545638 3612 ntTSL 2 BASIC7.63□□□□□ -1.19
USB1Q9BQ65 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
USB1Q9BQ65 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 MAGI2-214ENST00000628781 2013 ntTSL 2 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 ZNF468-201ENST00000243639 4027 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
USB1Q9BQ65 NR1I3-205ENST00000367983 1473 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
USB1Q9BQ65 MTND5P33-201ENST00000571250 1450 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 PRKAR1A-211ENST00000586397 1940 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
USB1Q9BQ65 CCDC144B-201ENST00000285176 4310 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 CEACAM8-201ENST00000244336 2305 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
USB1Q9BQ65 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
USB1Q9BQ65 POLR2D-203ENST00000409955 1758 ntTSL 2 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
USB1Q9BQ65 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 NACAP2-201ENST00000318548 624 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 RNU6-666P-201ENST00000363499 107 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 OR2AK2-201ENST00000366480 1154 ntAPPRIS ALT2 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 MT-TS1-201ENST00000387416 69 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 RNU6-1158P-201ENST00000391167 107 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 SRI-202ENST00000394641 653 ntTSL 2 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 AC073264.1-201ENST00000411508 416 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 VDAC1P10-201ENST00000416715 891 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 OR10T1P-201ENST00000424327 947 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 VNN3-208ENST00000427187 1214 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
USB1Q9BQ65 ISX-AS1-201ENST00000427881 202 ntTSL 3 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 RPSAP53-201ENST00000433498 862 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 AL627308.1-201ENST00000435693 821 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 BNIP3P2-201ENST00000441221 577 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 GAPDHP56-201ENST00000506031 988 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 AC138409.2-202ENST00000507274 458 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 PCBP2P3-201ENST00000509726 843 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 AC105417.1-201ENST00000514691 285 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 IGLVI-68-201ENST00000519525 345 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 CCAR2-208ENST00000521301 337 ntTSL 3 BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms