Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 Z92846.1-201ENST00000456203 268 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 ACA64.4-201ENST00000459070 127 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 MIR4444-1-201ENST00000581696 74 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 MIR4444-2-201ENST00000584390 74 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 AC060766.1-201ENST00000590824 627 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 AL627230.1-201ENST00000613077 211 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 AL356752.1-201ENST00000615844 593 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 AL591926.8-201ENST00000616876 211 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 AC008785.1-201ENST00000624475 456 ntBASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 SVOP-205ENST00000610966 6813 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CSMD1Q96PZ7 MECP2-201ENST00000303391 10505 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 GIT2-203ENST00000355312 5466 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 PWAR1-201ENST00000624188 2414 ntBASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 RNU1-149P-201ENST00000390870 161 ntBASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 AC093655.2-201ENST00000425735 631 ntBASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 RPS3AP38-201ENST00000435889 763 ntBASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 RPL36AP15-201ENST00000444514 266 ntBASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 MIR6830-201ENST00000636015 70 ntBASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 LRRC37A6P-202ENST00000448648 5444 ntBASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 AL034546.1-201ENST00000623740 3693 ntBASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 AC025750.1-201ENST00000399891 379 ntBASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 RN7SKP126-201ENST00000411143 300 ntBASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 EIF2S2P2-201ENST00000447161 982 ntBASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 RN7SL690P-201ENST00000582087 240 ntBASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 MIR4298-201ENST00000584380 73 ntBASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 AL353763.1-201ENST00000624467 1628 ntBASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 ATP6V1C1-201ENST00000395862 5612 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 GPR161-210ENST00000546300 7388 ntTSL 2 BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 RPL23AP60-201ENST00000450011 454 ntBASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 AL512782.1-201ENST00000603093 364 ntBASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CSMD1Q96PZ7 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 MIR133B-201ENST00000362210 119 ntBASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 MIR208A-201ENST00000362287 71 ntBASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 AL590399.4-201ENST00000436561 601 ntBASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 AC021678.3-201ENST00000517893 476 ntBASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 NPM1P42-201ENST00000560329 862 ntBASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 MIR4260-201ENST00000583107 67 ntBASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 AC019193.2-201ENST00000610012 634 ntBASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 TCL6_3.1-201ENST00000619064 137 ntBASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 BSN-201ENST00000296452 15955 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 ZNF776-201ENST00000317178 5292 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 ASNSP1-204ENST00000641977 1664 ntBASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 DCN-218ENST00000551354 2924 ntTSL 3 BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 AC139713.2-214ENST00000642059 1811 ntBASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 RN7SKP95-201ENST00000362860 303 ntBASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 AC244502.2-201ENST00000543361 851 ntBASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms