Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC8.47□□□□□ -1.05
TRIM47Q96LD4 RPS27AP19-201ENST00000597285 458 ntBASIC8.47□□□□□ -1.05
TRIM47Q96LD4 WISP1-OT1-201ENST00000602893 642 ntBASIC8.47□□□□□ -1.05
TRIM47Q96LD4 AL451085.1-201ENST00000604546 690 ntBASIC8.47□□□□□ -1.05
TRIM47Q96LD4 AL359091.2-201ENST00000609303 556 ntBASIC8.47□□□□□ -1.05
TRIM47Q96LD4 AL445423.1-201ENST00000609941 536 ntBASIC8.47□□□□□ -1.05
TRIM47Q96LD4 AL138478.1-201ENST00000612252 832 ntBASIC8.47□□□□□ -1.05
TRIM47Q96LD4 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC8.47□□□□□ -1.05
TRIM47Q96LD4 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC8.47□□□□□ -1.05
TRIM47Q96LD4 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC8.47□□□□□ -1.05
TRIM47Q96LD4 ZNRD1ASP-221ENST00000637794 1074 ntBASIC8.47□□□□□ -1.05
TRIM47Q96LD4 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRIM47Q96LD4 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
TRIM47Q96LD4 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRIM47Q96LD4 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRIM47Q96LD4 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
TRIM47Q96LD4 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRIM47Q96LD4 NEK2P2-201ENST00000438441 1338 ntBASIC8.47□□□□□ -1.05
TRIM47Q96LD4 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC8.47□□□□□ -1.05
TRIM47Q96LD4 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRIM47Q96LD4 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TRIM47Q96LD4 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRIM47Q96LD4 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRIM47Q96LD4 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC8.47□□□□□ -1.05
TRIM47Q96LD4 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRIM47Q96LD4 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC8.47□□□□□ -1.05
TRIM47Q96LD4 MTND5P1-201ENST00000445440 1375 ntBASIC8.47□□□□□ -1.05
TRIM47Q96LD4 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
TRIM47Q96LD4 FGG-201ENST00000336098 1659 ntTSL 2 BASIC8.46□□□□□ -1.05
TRIM47Q96LD4 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
TRIM47Q96LD4 CASC19-205ENST00000641013 1411 ntBASIC8.46□□□□□ -1.05
TRIM47Q96LD4 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC8.46□□□□□ -1.05
TRIM47Q96LD4 AC015871.4-201ENST00000624650 2260 ntBASIC8.46□□□□□ -1.05
TRIM47Q96LD4 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC8.46□□□□□ -1.05
TRIM47Q96LD4 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC8.46□□□□□ -1.05
TRIM47Q96LD4 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.05
TRIM47Q96LD4 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
TRIM47Q96LD4 TRIM51HP-202ENST00000530412 1823 ntBASIC8.46□□□□□ -1.06
TRIM47Q96LD4 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 CREM-214ENST00000395887 849 ntTSL 5 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 AL022100.1-202ENST00000421214 548 ntBASIC8.46□□□□□ -1.06
TRIM47Q96LD4 RPL23AP85-201ENST00000421838 433 ntBASIC8.46□□□□□ -1.06
TRIM47Q96LD4 ZBTB8OSP2-201ENST00000423890 504 ntBASIC8.46□□□□□ -1.06
TRIM47Q96LD4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 AC083855.1-201ENST00000440041 258 ntBASIC8.46□□□□□ -1.06
TRIM47Q96LD4 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 CREM-224ENST00000468236 582 ntTSL 3 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 MYL6P4-201ENST00000477911 453 ntBASIC8.46□□□□□ -1.06
TRIM47Q96LD4 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 IGBP1P4-201ENST00000503202 879 ntBASIC8.46□□□□□ -1.06
TRIM47Q96LD4 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 AC097173.1-201ENST00000505862 819 ntBASIC8.46□□□□□ -1.06
TRIM47Q96LD4 AC017037.1-201ENST00000508460 471 ntBASIC8.46□□□□□ -1.06
TRIM47Q96LD4 AC022296.2-201ENST00000512424 202 ntBASIC8.46□□□□□ -1.06
TRIM47Q96LD4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 AC116917.1-201ENST00000520558 305 ntBASIC8.46□□□□□ -1.06
TRIM47Q96LD4 OR7E10P-201ENST00000526420 991 ntBASIC8.46□□□□□ -1.06
TRIM47Q96LD4 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 PDCD5P1-201ENST00000543528 309 ntBASIC8.46□□□□□ -1.06
TRIM47Q96LD4 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 AL391840.1-201ENST00000571144 367 ntBASIC8.46□□□□□ -1.06
TRIM47Q96LD4 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 DHFRP1-201ENST00000579682 559 ntBASIC8.46□□□□□ -1.06
TRIM47Q96LD4 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC8.46□□□□□ -1.06
TRIM47Q96LD4 AC099667.1-201ENST00000624222 469 ntBASIC8.46□□□□□ -1.06
TRIM47Q96LD4 MIR3688-2-201ENST00000636963 87 ntBASIC8.46□□□□□ -1.06
TRIM47Q96LD4 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
TRIM47Q96LD4 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TRIM47Q96LD4 AC090132.1-201ENST00000524071 1480 ntBASIC8.45□□□□□ -1.06
TRIM47Q96LD4 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TRIM47Q96LD4 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TRIM47Q96LD4 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC8.45□□□□□ -1.06
TRIM47Q96LD4 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TRIM47Q96LD4 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC8.45□□□□□ -1.06
TRIM47Q96LD4 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TRIM47Q96LD4 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TRIM47Q96LD4 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
TRIM47Q96LD4 FAM3C2-201ENST00000312214 681 ntBASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms