Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL731532.1-201ENST00000623972 4236 ntBASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 COX6B1P3-201ENST00000312310 260 ntBASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 SNORD1C-201ENST00000363315 78 ntBASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 RNA5-8SP5-201ENST00000365304 152 ntBASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 XIST-201ENST00000416330 750 ntTSL 2 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 IGLV3-4-201ENST00000432300 244 ntBASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 PNKDP1-201ENST00000435914 430 ntBASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 PPIAP10-201ENST00000438675 458 ntBASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 PPIAP7-201ENST00000454070 489 ntBASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 RN7SL352P-201ENST00000466002 277 ntBASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 AC104629.2-201ENST00000468627 598 ntBASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 IGKV3D-25-201ENST00000519599 235 ntBASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 AP000620.1-201ENST00000527147 504 ntBASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 AC079905.1-201ENST00000549280 475 ntBASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 AC005726.4-201ENST00000582858 458 ntBASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 AC015982.1-201ENST00000608113 465 ntBASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 AC004801.6-201ENST00000616571 978 ntBASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 AP003499.2-201ENST00000624100 483 ntBASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 MAPK10-350ENST00000641777 965 ntBASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 AP001541.1-201ENST00000623322 1904 ntBASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CHMP4CQ96CF2 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 AC024651.2-201ENST00000562480 2098 ntBASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 RNA5SP375-201ENST00000362975 119 ntBASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 AC004386.1-201ENST00000393214 761 ntBASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 AL356057.1-202ENST00000402263 756 ntBASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 LYPLA1P3-201ENST00000402650 695 ntBASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 AC073464.3-201ENST00000422564 712 ntBASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 AC073508.1-201ENST00000428866 656 ntBASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 ATP5LP2-201ENST00000440646 311 ntBASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 RAB28P3-201ENST00000448325 597 ntBASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 AL035690.1-201ENST00000490892 383 ntBASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 SSR3-208ENST00000496050 579 ntTSL 4 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 SETP21-201ENST00000514799 892 ntBASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 RNA5SP340-201ENST00000517132 107 ntBASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 RNU6-889P-201ENST00000517189 103 ntBASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 AC027369.2-201ENST00000528030 440 ntBASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 AC027334.1-201ENST00000603257 310 ntBASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 BNIP3P19-201ENST00000605397 577 ntBASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CHMP4CQ96CF2 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 AC093909.5-201ENST00000621839 1799 ntBASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms