Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.76□□□□□ -1.33
HPS3Q969F9 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HPS3Q969F9 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.76□□□□□ -1.33
HPS3Q969F9 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
HPS3Q969F9 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HPS3Q969F9 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HPS3Q969F9 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.76□□□□□ -1.33
HPS3Q969F9 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
HPS3Q969F9 AC005225.5-201ENST00000623547 2225 ntBASIC6.76□□□□□ -1.33
HPS3Q969F9 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HPS3Q969F9 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.76□□□□□ -1.33
HPS3Q969F9 SAMMSON-210ENST00000641260 1308 ntBASIC6.76□□□□□ -1.33
HPS3Q969F9 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HPS3Q969F9 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
HPS3Q969F9 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.75□□□□□ -1.33
HPS3Q969F9 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HPS3Q969F9 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
HPS3Q969F9 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HPS3Q969F9 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
HPS3Q969F9 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.75□□□□□ -1.33
HPS3Q969F9 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.75□□□□□ -1.33
HPS3Q969F9 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.75□□□□□ -1.33
HPS3Q969F9 PPBPP2-201ENST00000513150 1362 ntBASIC6.75□□□□□ -1.33
HPS3Q969F9 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.75□□□□□ -1.33
HPS3Q969F9 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HPS3Q969F9 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.75□□□□□ -1.33
HPS3Q969F9 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.75□□□□□ -1.33
HPS3Q969F9 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.75□□□□□ -1.33
HPS3Q969F9 RPL23AP18-201ENST00000416139 468 ntBASIC6.75□□□□□ -1.33
HPS3Q969F9 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.75□□□□□ -1.33
HPS3Q969F9 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.75□□□□□ -1.33
HPS3Q969F9 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.75□□□□□ -1.33
HPS3Q969F9 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HPS3Q969F9 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.75□□□□□ -1.33
HPS3Q969F9 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
HPS3Q969F9 AC010240.2-201ENST00000445363 1205 ntBASIC6.75□□□□□ -1.33
HPS3Q969F9 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.75□□□□□ -1.33
HPS3Q969F9 AL627224.1-201ENST00000448334 444 ntBASIC6.75□□□□□ -1.33
HPS3Q969F9 ATP5G1P3-201ENST00000463301 410 ntBASIC6.75□□□□□ -1.33
HPS3Q969F9 AC104339.1-201ENST00000465478 348 ntBASIC6.75□□□□□ -1.33
HPS3Q969F9 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.75□□□□□ -1.33
HPS3Q969F9 NPM1P17-201ENST00000479221 602 ntBASIC6.75□□□□□ -1.33
HPS3Q969F9 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.75□□□□□ -1.33
HPS3Q969F9 AC122718.2-201ENST00000505325 591 ntBASIC6.75□□□□□ -1.33
HPS3Q969F9 AC113367.2-201ENST00000505749 160 ntBASIC6.75□□□□□ -1.33
HPS3Q969F9 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HPS3Q969F9 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.75□□□□□ -1.33
HPS3Q969F9 SCARNA1-201ENST00000517138 166 ntBASIC6.75□□□□□ -1.33
HPS3Q969F9 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
HPS3Q969F9 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.75□□□□□ -1.33
HPS3Q969F9 AP001804.1-201ENST00000526868 919 ntBASIC6.75□□□□□ -1.33
HPS3Q969F9 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.75□□□□□ -1.33
HPS3Q969F9 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HPS3Q969F9 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.75□□□□□ -1.33
HPS3Q969F9 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.75□□□□□ -1.33
HPS3Q969F9 AC004890.3-201ENST00000605566 1095 ntBASIC6.75□□□□□ -1.33
HPS3Q969F9 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.75□□□□□ -1.33
HPS3Q969F9 uc_338.26-201ENST00000612659 160 ntBASIC6.75□□□□□ -1.33
HPS3Q969F9 uc_338.31-201ENST00000615595 186 ntBASIC6.75□□□□□ -1.33
HPS3Q969F9 MIR1264-201ENST00000616374 69 ntBASIC6.75□□□□□ -1.33
HPS3Q969F9 RMST_5.1-201ENST00000618704 126 ntBASIC6.75□□□□□ -1.33
HPS3Q969F9 AL512652.1-201ENST00000619006 500 ntBASIC6.75□□□□□ -1.33
HPS3Q969F9 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HPS3Q969F9 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
HPS3Q969F9 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.75□□□□□ -1.33
HPS3Q969F9 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
HPS3Q969F9 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
HPS3Q969F9 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.75□□□□□ -1.33
HPS3Q969F9 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.75□□□□□ -1.33
HPS3Q969F9 AC123769.1-201ENST00000530992 3192 ntBASIC6.75□□□□□ -1.33
HPS3Q969F9 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HPS3Q969F9 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
HPS3Q969F9 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.74□□□□□ -1.33
HPS3Q969F9 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.74□□□□□ -1.33
HPS3Q969F9 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HPS3Q969F9 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HPS3Q969F9 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
HPS3Q969F9 AC027575.3-201ENST00000583058 2747 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HPS3Q969F9 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
HPS3Q969F9 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HPS3Q969F9 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HPS3Q969F9 RNA5SP232-201ENST00000364144 119 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.74□□□□□ -1.33
HPS3Q969F9 AL132875.1-201ENST00000403623 949 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 CBX1P3-201ENST00000413296 527 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 PTCD2P2-201ENST00000415579 1095 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 SETP9-201ENST00000423837 832 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 AC099782.1-201ENST00000425889 474 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 AC016027.5-201ENST00000427227 210 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 RPSAP65-201ENST00000429660 595 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 AC046176.1-201ENST00000435260 1170 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 OR3D1P-201ENST00000438288 955 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 MOB1AP2-201ENST00000446060 614 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 MTND2P6-201ENST00000455337 1030 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 AL445687.2-201ENST00000458156 728 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.74□□□□□ -1.33
HPS3Q969F9 RPEP1-201ENST00000504507 658 ntBASIC6.74□□□□□ -1.33
HPS3Q969F9 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HPS3Q969F9 TPT1P8-201ENST00000510120 555 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms