Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 AC068228.1-201ENST00000461723 211 ntBASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 AC023194.2-201ENST00000465398 406 ntBASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 AC122718.2-201ENST00000505325 591 ntBASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 HSD3BP3-201ENST00000514706 994 ntBASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 KCTD9P6-201ENST00000522306 950 ntBASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 AC027026.1-201ENST00000532323 742 ntBASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 AL845552.1-201ENST00000556820 323 ntBASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 AL136131.3-201ENST00000607600 188 ntBASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 MIR6806-201ENST00000622141 64 ntBASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 CASC19-238ENST00000641523 1558 ntBASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
TRAF3IP1Q8TDR0 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 AL592429.1-201ENST00000403909 1473 ntBASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 AC104966.1-201ENST00000467010 1464 ntBASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 VN1R21P-201ENST00000426703 765 ntBASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 AC015983.1-201ENST00000441577 373 ntBASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 CFL1P4-201ENST00000451536 498 ntBASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 MEMO1P4-201ENST00000453590 386 ntBASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 AC118758.1-202ENST00000454719 225 ntBASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 AC093815.1-201ENST00000508637 280 ntBASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 GAPDHP71-201ENST00000511530 1003 ntBASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 AC084121.1-201ENST00000533882 835 ntBASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 AC025423.2-201ENST00000537570 439 ntBASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 MIR4776-2-201ENST00000580204 80 ntBASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 AC090236.2-201ENST00000587933 1101 ntBASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 AC000095.2-202ENST00000637415 154 ntBASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 AL355834.1-201ENST00000556602 3965 ntBASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRAF3IP1Q8TDR0 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
TRAF3IP1Q8TDR0 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
TRAF3IP1Q8TDR0 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRAF3IP1Q8TDR0 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRAF3IP1Q8TDR0 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.04□□□□□ -1.44
TRAF3IP1Q8TDR0 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.04□□□□□ -1.44
TRAF3IP1Q8TDR0 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRAF3IP1Q8TDR0 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRAF3IP1Q8TDR0 COX6B1P3-201ENST00000312310 260 ntBASIC6.04□□□□□ -1.44
TRAF3IP1Q8TDR0 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRAF3IP1Q8TDR0 RN7SKP78-201ENST00000364711 318 ntBASIC6.04□□□□□ -1.44
TRAF3IP1Q8TDR0 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
TRAF3IP1Q8TDR0 U3.23-201ENST00000391132 200 ntBASIC6.04□□□□□ -1.44
TRAF3IP1Q8TDR0 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms