Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC023141.8-201ENST00000442554 208 ntBASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
ALMS1Q8TCU4 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.81
ALMS1Q8TCU4 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.81
ALMS1Q8TCU4 AC005225.5-201ENST00000623547 2225 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 RPL18P10-201ENST00000425606 538 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 RHOT1P3-201ENST00000436571 331 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 AC104634.1-201ENST00000452720 462 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 Z92846.1-201ENST00000456203 268 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 AL110118.1-201ENST00000553543 400 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 AC011742.2-201ENST00000443818 352 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 AC026979.1-201ENST00000492525 396 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 AC025674.1-201ENST00000507074 324 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 AC009831.5-201ENST00000624000 3189 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 AC007159.1-201ENST00000566529 4706 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 AC211486.3-201ENST00000412694 621 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 AL603882.1-201ENST00000463059 681 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 AL109618.2-201ENST00000605527 211 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 AC005618.1-201ENST00000606901 3148 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 HSPD1P8-201ENST00000400121 1658 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 FHIT-201ENST00000341848 174 ntTSL 3 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 RN7SKP95-201ENST00000362860 303 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 RNU1-149P-201ENST00000390870 161 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 GAPDHP42-201ENST00000406848 981 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 RPS23P2-201ENST00000463671 415 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 OR7H2P-201ENST00000513483 306 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 AC134698.5-201ENST00000519444 336 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 AC011497.2-201ENST00000600255 639 ntBASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
ALMS1Q8TCU4 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ALMS1Q8TCU4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.76□□□□□ -1.81
ALMS1Q8TCU4 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC3.76□□□□□ -1.81
ALMS1Q8TCU4 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC3.76□□□□□ -1.81
ALMS1Q8TCU4 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC3.76□□□□□ -1.81
ALMS1Q8TCU4 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
ALMS1Q8TCU4 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ALMS1Q8TCU4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
ALMS1Q8TCU4 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms