Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AC007346.2-201ENST00000564816 892 ntBASIC6.32□□□□□ -1.4
BEST2Q8NFU1 MIR4260-201ENST00000583107 67 ntBASIC6.32□□□□□ -1.4
BEST2Q8NFU1 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 AL355974.3-201ENST00000617383 467 ntBASIC6.32□□□□□ -1.4
BEST2Q8NFU1 MIR6886-201ENST00000619864 61 ntBASIC6.32□□□□□ -1.4
BEST2Q8NFU1 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 HSPD1P8-201ENST00000400121 1658 ntBASIC6.32□□□□□ -1.4
BEST2Q8NFU1 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 SNORD1C-201ENST00000363315 78 ntBASIC6.31□□□□□ -1.4
BEST2Q8NFU1 AL365220.1-201ENST00000432923 399 ntBASIC6.31□□□□□ -1.4
BEST2Q8NFU1 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 RNU1-88P-201ENST00000459274 128 ntBASIC6.31□□□□□ -1.4
BEST2Q8NFU1 AL157777.1-201ENST00000468100 304 ntBASIC6.31□□□□□ -1.4
BEST2Q8NFU1 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 AC011411.1-201ENST00000509592 876 ntBASIC6.31□□□□□ -1.4
BEST2Q8NFU1 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 MTND2P31-201ENST00000512602 616 ntBASIC6.31□□□□□ -1.4
BEST2Q8NFU1 AC087272.1-201ENST00000523624 533 ntBASIC6.31□□□□□ -1.4
BEST2Q8NFU1 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 AC244502.2-201ENST00000543361 851 ntBASIC6.31□□□□□ -1.4
BEST2Q8NFU1 AP001496.3-201ENST00000580230 913 ntBASIC6.31□□□□□ -1.4
BEST2Q8NFU1 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 AC132825.8-201ENST00000640783 297 ntBASIC6.31□□□□□ -1.4
BEST2Q8NFU1 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
BEST2Q8NFU1 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 AC011504.1-201ENST00000623331 4103 ntBASIC6.3□□□□□ -1.4
BEST2Q8NFU1 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 SDHDP6-201ENST00000414693 480 ntBASIC6.3□□□□□ -1.4
BEST2Q8NFU1 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 RPL34P27-201ENST00000428810 349 ntBASIC6.3□□□□□ -1.4
BEST2Q8NFU1 BX119321.1-201ENST00000428912 797 ntBASIC6.3□□□□□ -1.4
BEST2Q8NFU1 SUMO2P3-201ENST00000438311 288 ntBASIC6.3□□□□□ -1.4
BEST2Q8NFU1 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 AC018638.3-201ENST00000461273 132 ntBASIC6.3□□□□□ -1.4
BEST2Q8NFU1 AP002371.1-201ENST00000463604 433 ntBASIC6.3□□□□□ -1.4
BEST2Q8NFU1 RPS17P15-201ENST00000475609 349 ntBASIC6.3□□□□□ -1.4
BEST2Q8NFU1 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 CCNHP1-201ENST00000513311 678 ntBASIC6.3□□□□□ -1.4
BEST2Q8NFU1 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 TMEM97P2-201ENST00000517841 403 ntBASIC6.3□□□□□ -1.4
BEST2Q8NFU1 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 AC027544.3-201ENST00000535082 757 ntBASIC6.3□□□□□ -1.4
BEST2Q8NFU1 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 AC069234.4-201ENST00000621276 412 ntBASIC6.3□□□□□ -1.4
BEST2Q8NFU1 AC069542.2-201ENST00000624816 216 ntBASIC6.3□□□□□ -1.4
BEST2Q8NFU1 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BEST2Q8NFU1 IMMTP1-201ENST00000435590 2219 ntBASIC6.3□□□□□ -1.4
BEST2Q8NFU1 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms