Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 AC096921.2-201ENST00000561507 1916 ntBASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 RPL23P2-201ENST00000320371 421 ntBASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 AL159987.1-201ENST00000347911 293 ntBASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 RPL32P3-201ENST00000359025 275 ntBASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 SNORA16A-201ENST00000384342 137 ntBASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 AC012512.1-201ENST00000446594 718 ntBASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 AC002075.1-201ENST00000457396 676 ntBASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 RNU4ATAC-201ENST00000580972 127 ntBASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 AC107980.1-201ENST00000558671 3355 ntBASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 MIR433-201ENST00000384837 93 ntBASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 SNORA11F-201ENST00000408237 128 ntBASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 ACA64.4-201ENST00000459070 127 ntBASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 AC026979.1-201ENST00000492525 396 ntBASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 AC095057.1-201ENST00000507583 168 ntBASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 AC069307.1-201ENST00000602820 447 ntBASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC168Q8NDH2 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CCDC168Q8NDH2 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
CCDC168Q8NDH2 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
CCDC168Q8NDH2 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CCDC168Q8NDH2 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.8□□□□□ -1.64
CCDC168Q8NDH2 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC168Q8NDH2 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CCDC168Q8NDH2 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
CCDC168Q8NDH2 U3.36-201ENST00000408418 213 ntBASIC4.8□□□□□ -1.64
CCDC168Q8NDH2 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC168Q8NDH2 FTH1P25-201ENST00000447665 469 ntBASIC4.8□□□□□ -1.64
CCDC168Q8NDH2 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC168Q8NDH2 RN7SL51P-201ENST00000468230 285 ntBASIC4.8□□□□□ -1.64
CCDC168Q8NDH2 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC168Q8NDH2 AC093824.1-201ENST00000508796 343 ntBASIC4.8□□□□□ -1.64
CCDC168Q8NDH2 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CCDC168Q8NDH2 AP000919.1-201ENST00000582850 985 ntBASIC4.8□□□□□ -1.64
CCDC168Q8NDH2 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC168Q8NDH2 TAS2R6P-201ENST00000605022 826 ntBASIC4.8□□□□□ -1.64
CCDC168Q8NDH2 AC000068.2-201ENST00000608816 460 ntBASIC4.8□□□□□ -1.64
CCDC168Q8NDH2 AL450226.2-201ENST00000622913 439 ntBASIC4.8□□□□□ -1.64
CCDC168Q8NDH2 AC016717.3-201ENST00000624730 554 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms